Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_A09
         (1279 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37092-8|CAA85460.2|  327|Caenorhabditis elegans Hypothetical pr...    35   0.14 
AY037792-1|AAK94756.1|  327|Caenorhabditis elegans SRA-12 protein.     35   0.14 
Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical pr...    31   1.8  
Z74038-1|CAA98497.2|  578|Caenorhabditis elegans Hypothetical pr...    31   1.8  
Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr...    31   1.8  
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ...    31   2.3  
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related...    31   2.3  
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr...    29   9.3  

>Z37092-8|CAA85460.2|  327|Caenorhabditis elegans Hypothetical
           protein F44F4.7 protein.
          Length = 327

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = +2

Query: 554 YTYFPNLRDLQGLCYMSMSISMALGFLSLGVLQLNTGFRQDLCTLTGFVVYTWMIA 721
           Y    NL+  Q +CY+S++  +A+   S GVL +    R+++ TL  F V  W+ A
Sbjct: 223 YLTSENLKTTQAICYLSIAQFLAMFMYSGGVLLMRKN-RENIPTLIYFNVIVWVYA 277


>AY037792-1|AAK94756.1|  327|Caenorhabditis elegans SRA-12 protein.
          Length = 327

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = +2

Query: 554 YTYFPNLRDLQGLCYMSMSISMALGFLSLGVLQLNTGFRQDLCTLTGFVVYTWMIA 721
           Y    NL+  Q +CY+S++  +A+   S GVL +    R+++ TL  F V  W+ A
Sbjct: 223 YLTSENLKTTQAICYLSIAQFLAMFMYSGGVLLMRKN-RENIPTLIYFNVIVWVYA 277


>Z74038-2|CAE48502.1|  611|Caenorhabditis elegans Hypothetical
           protein F58B4.1b protein.
          Length = 611

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +2

Query: 683 TLTGFVVYTWMIATFFWMNVICINVCRSVLNASRLAKSDRKQFLWYSCYAWGGTLA 850
           T T  +V  +  A  FW NV CIN+ +S    +R+     + F    CY++ G ++
Sbjct: 182 TATPKIVKAFEQAVAFWQNVTCINIMQSSTAINRI-----RVFKGQGCYSYVGRIS 232


>Z74038-1|CAA98497.2|  578|Caenorhabditis elegans Hypothetical
           protein F58B4.1a protein.
          Length = 578

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +2

Query: 683 TLTGFVVYTWMIATFFWMNVICINVCRSVLNASRLAKSDRKQFLWYSCYAWGGTLA 850
           T T  +V  +  A  FW NV CIN+ +S    +R+     + F    CY++ G ++
Sbjct: 182 TATPKIVKAFEQAVAFWQNVTCINIMQSSTAINRI-----RVFKGQGCYSYVGRIS 232


>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical
           protein ZK675.1 protein.
          Length = 1405

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 139 LAFKQKKHEGNYFIRVIV-LWNRCIREAMLSRWRNNFTTG*MRHRAN 276
           L FKQK    +    + +  WN    E +L  W+ NFT     H+AN
Sbjct: 575 LRFKQKPGRNSMKTGLDMDAWNETAAEQVLQAWQRNFTKSLYNHKAN 621


>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
           repeats, ras-likedomain, kinase protein 1 protein.
          Length = 2395

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 333 PFKIISFNSNLPLLQFMLTIGSVPHLP 253
           PF + +FN NLPL+  +L  G+  +LP
Sbjct: 367 PFMLAAFNQNLPLMTLLLDAGADVNLP 393


>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
           kinase protein.
          Length = 2393

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -2

Query: 333 PFKIISFNSNLPLLQFMLTIGSVPHLP 253
           PF + +FN NLPL+  +L  G+  +LP
Sbjct: 365 PFMLAAFNQNLPLMTLLLDAGADVNLP 391


>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical protein
            ZK328.7a protein.
          Length = 1332

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +1

Query: 658  YRVPSRFMYIDRIRRVHLDDSNILLDERDLYKRMSFSAQRFSLGEIG 798
            ++   RF+      R+H  D + +    D + RM+F+A R  +  +G
Sbjct: 1128 FQSTDRFLLAQNFIRMHTTDKSAIQAALDEFNRMAFNADRSQVTNVG 1174


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,589,811
Number of Sequences: 27780
Number of extensions: 554964
Number of successful extensions: 1536
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3568584636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)