Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_A08
(1257 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X71138-1|CAA50468.1| 112|Drosophila melanogaster Hmg-D protein ... 55 2e-07
M77023-1|AAA28609.1| 112|Drosophila melanogaster high mobility ... 55 2e-07
AY118333-1|AAM48362.1| 112|Drosophila melanogaster LD24628p pro... 55 2e-07
AM294363-1|CAL26293.1| 112|Drosophila melanogaster CG17950 prot... 55 2e-07
AM294362-1|CAL26292.1| 112|Drosophila melanogaster CG17950 prot... 55 2e-07
AM294361-1|CAL26291.1| 112|Drosophila melanogaster CG17950 prot... 55 2e-07
AM294360-1|CAL26290.1| 112|Drosophila melanogaster CG17950 prot... 55 2e-07
AM294359-1|CAL26289.1| 112|Drosophila melanogaster CG17950 prot... 55 2e-07
AM294358-1|CAL26288.1| 112|Drosophila melanogaster CG17950 prot... 55 2e-07
AM294357-1|CAL26287.1| 112|Drosophila melanogaster CG17950 prot... 55 2e-07
AM294356-1|CAL26286.1| 112|Drosophila melanogaster CG17950 prot... 55 2e-07
AM294355-1|CAL26285.1| 112|Drosophila melanogaster CG17950 prot... 55 2e-07
AM294354-1|CAL26284.1| 112|Drosophila melanogaster CG17950 prot... 55 2e-07
AM294353-1|CAL26283.1| 112|Drosophila melanogaster CG17950 prot... 55 2e-07
AE013599-3267|AAM71011.1| 112|Drosophila melanogaster CG17950-P... 55 2e-07
AE013599-3266|AAF46759.1| 112|Drosophila melanogaster CG17950-P... 55 2e-07
X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein. 54 3e-07
L08825-1|AAA28914.1| 723|Drosophila melanogaster single-strande... 54 3e-07
BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p pro... 54 3e-07
AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA... 54 3e-07
X71139-1|CAA50469.1| 111|Drosophila melanogaster Hmg-Z protein ... 53 7e-07
AY113439-1|AAM29444.1| 111|Drosophila melanogaster RE28596p pro... 53 7e-07
AE013599-3264|AAM70934.1| 111|Drosophila melanogaster CG17921-P... 53 7e-07
AE013599-3263|AAF46758.1| 111|Drosophila melanogaster CG17921-P... 53 7e-07
AY070828-1|AAL48450.1| 138|Drosophila melanogaster AT28425p pro... 34 0.36
AE014297-3170|AAF56011.1| 133|Drosophila melanogaster CG7046-PA... 34 0.36
AE014297-3169|AAF56010.1| 126|Drosophila melanogaster CG7045-PA... 32 1.4
>X71138-1|CAA50468.1| 112|Drosophila melanogaster Hmg-D protein
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>M77023-1|AAA28609.1| 112|Drosophila melanogaster high mobility
group protein protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AY118333-1|AAM48362.1| 112|Drosophila melanogaster LD24628p
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294363-1|CAL26293.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294362-1|CAL26292.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294361-1|CAL26291.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294360-1|CAL26290.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294359-1|CAL26289.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294358-1|CAL26288.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294357-1|CAL26287.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294356-1|CAL26286.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294355-1|CAL26285.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294354-1|CAL26284.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AM294353-1|CAL26283.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AE013599-3267|AAM71011.1| 112|Drosophila melanogaster CG17950-PB,
isoform B protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>AE013599-3266|AAF46759.1| 112|Drosophila melanogaster CG17950-PA,
isoform A protein.
Length = 112
Score = 55.2 bits (127), Expect = 2e-07
Identities = 19/27 (70%), Positives = 27/27 (100%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTE+AK+GGE+W++MKDK+EW
Sbjct: 26 ENPGIKVTEVAKRGGELWRAMKDKSEW 52
>X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein.
Length = 723
Score = 54.4 bits (125), Expect = 3e-07
Identities = 20/27 (74%), Positives = 26/27 (96%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTEIAKKGGE+WK +KDK++W
Sbjct: 576 ENPGIKVTEIAKKGGEMWKELKDKSKW 602
>L08825-1|AAA28914.1| 723|Drosophila melanogaster single-stranded
recognition proteinprotein.
Length = 723
Score = 54.4 bits (125), Expect = 3e-07
Identities = 20/27 (74%), Positives = 26/27 (96%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTEIAKKGGE+WK +KDK++W
Sbjct: 576 ENPGIKVTEIAKKGGEMWKELKDKSKW 602
>BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p
protein.
Length = 723
Score = 54.4 bits (125), Expect = 3e-07
Identities = 20/27 (74%), Positives = 26/27 (96%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTEIAKKGGE+WK +KDK++W
Sbjct: 576 ENPGIKVTEIAKKGGEMWKELKDKSKW 602
>AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA
protein.
Length = 723
Score = 54.4 bits (125), Expect = 3e-07
Identities = 20/27 (74%), Positives = 26/27 (96%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEW 169
ENPG++VTEIAKKGGE+WK +KDK++W
Sbjct: 576 ENPGIKVTEIAKKGGEMWKELKDKSKW 602
>X71139-1|CAA50469.1| 111|Drosophila melanogaster Hmg-Z protein
protein.
Length = 111
Score = 53.2 bits (122), Expect = 7e-07
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEWXXXXXXXXXXXXXDLESYNAN 232
+NPG +VT+IAK+GGE+W+ +KDKTEW ++ Y AN
Sbjct: 27 DNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEYNKAVKEYEAN 74
>AY113439-1|AAM29444.1| 111|Drosophila melanogaster RE28596p
protein.
Length = 111
Score = 53.2 bits (122), Expect = 7e-07
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEWXXXXXXXXXXXXXDLESYNAN 232
+NPG +VT+IAK+GGE+W+ +KDKTEW ++ Y AN
Sbjct: 27 DNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEYNKAVKEYEAN 74
>AE013599-3264|AAM70934.1| 111|Drosophila melanogaster CG17921-PB,
isoform B protein.
Length = 111
Score = 53.2 bits (122), Expect = 7e-07
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEWXXXXXXXXXXXXXDLESYNAN 232
+NPG +VT+IAK+GGE+W+ +KDKTEW ++ Y AN
Sbjct: 27 DNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEYNKAVKEYEAN 74
>AE013599-3263|AAF46758.1| 111|Drosophila melanogaster CG17921-PA,
isoform A protein.
Length = 111
Score = 53.2 bits (122), Expect = 7e-07
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKDKTEWXXXXXXXXXXXXXDLESYNAN 232
+NPG +VT+IAK+GGE+W+ +KDKTEW ++ Y AN
Sbjct: 27 DNPGSKVTDIAKRGGELWRGLKDKTEWEQKAIKMKEEYNKAVKEYEAN 74
>AY070828-1|AAL48450.1| 138|Drosophila melanogaster AT28425p
protein.
Length = 138
Score = 34.3 bits (75), Expect = 0.36
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKD--KTEWXXXXXXXXXXXXXDLESYNA 229
E+P V E++ KGGE+W++M D K W LE +NA
Sbjct: 30 EHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYKEKLEKWNA 78
>AE014297-3170|AAF56011.1| 133|Drosophila melanogaster CG7046-PA
protein.
Length = 133
Score = 34.3 bits (75), Expect = 0.36
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSMKD--KTEWXXXXXXXXXXXXXDLESYNA 229
E+P V E++ KGGE+W++M D K W LE +NA
Sbjct: 30 EHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKAMAEYKEKLEKWNA 78
>AE014297-3169|AAF56010.1| 126|Drosophila melanogaster CG7045-PA
protein.
Length = 126
Score = 32.3 bits (70), Expect = 1.4
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +2
Query: 89 ENPGLRVTEIAKKGGEIWKSM--KDKTEW 169
E+P V E++ KGGE+W++M +DK W
Sbjct: 30 EHPDFSVQEVSVKGGEMWRAMADEDKIVW 58
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,571,198
Number of Sequences: 53049
Number of extensions: 589239
Number of successful extensions: 1080
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6743497755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -