Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_A07
         (1246 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0787 - 31999632-32000045,32000128-32000214,32000295-320005...    32   1.1  

>01_06_0787 -
           31999632-32000045,32000128-32000214,32000295-32000584,
           32000670-32000844,32000930-32001142,32001227-32001328,
           32001418-32001822,32001922-32002134,32002312-32002357,
           32002602-32002867,32003936-32004012,32004095-32004170,
           32004339-32004418,32004945-32005036,32005132-32005171,
           32005301-32005400,32005815-32005962,32006071-32006153,
           32006207-32006383
          Length = 1027

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 219 HRYFVERIFLLKTLLKEADATDQREMRRQAYEIHNLSLL 335
           HR+  E+I +++ L KE+   D+R+ ++   E H  SLL
Sbjct: 368 HRHTAEQIRIMEALFKESPHPDERQRQQAVQERHENSLL 406


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,055,456
Number of Sequences: 37544
Number of extensions: 399855
Number of successful extensions: 715
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3841085160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)