Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_A05
         (1272 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...   429   e-122
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   8.2  

>AF080546-1|AAC29475.1|  432|Anopheles gambiae
            S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score =  429 bits (1058), Expect = e-122
 Identities = 203/272 (74%), Positives = 232/272 (85%), Gaps = 2/272 (0%)
 Frame = +2

Query: 200  PPYKIADEXLAEWGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLI 379
            P YK+AD  LAE+GRK I+LAE EMPGLMACR+KY P KIL+GARIAG LHMT+QTAVLI
Sbjct: 4    PAYKVADISLAEFGRKEIVLAENEMPGLMACRQKYGPLKILRGARIAGCLHMTIQTAVLI 63

Query: 380  ETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGK 559
            ETLIELGAEVQWSS NI+STQD AAAA+V  G+P+YAWKGETD+EY+WCI QTLIFPDGK
Sbjct: 64   ETLIELGAEVQWSSCNIFSTQDHAAAAMVKAGVPVYAWKGETDEEYMWCIRQTLIFPDGK 123

Query: 560  PLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDS 739
            PLNMILDDGGDLTNLVH ++P+LLK+++G++EETTTGVHNLYKMFREG L +PAINVNDS
Sbjct: 124  PLNMILDDGGDLTNLVHAEHPELLKEIRGLSEETTTGVHNLYKMFREGRLGMPAINVNDS 183

Query: 740  VTKSKFDNLYGCRESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKGLAVE*SLPK 919
            VTKSKFDNLYGCRESLLDGIKRATD+MIAGKVCVVAGYGDVGKGCAQA +G      + +
Sbjct: 184  VTKSKFDNLYGCRESLLDGIKRATDVMIAGKVCVVAGYGDVGKGCAQALRGSGGRVLITE 243

Query: 920  --SIHQRTSGRNGRFQVTTMEEAXXVGQILXT 1009
               I+   +   G+ +VTTMEEA    QI  T
Sbjct: 244  IDPINALQAAMEGK-EVTTMEEASKEAQIFVT 274


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 853 ITCHYTNFPGNHYVCCPFDSVEQRLPTSIQVVEFA 749
           ITCH    PG+    CP +S     PTS  + +++
Sbjct: 202 ITCHRCRKPGHMKRDCPMES--NNTPTSTTMRDYS 234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,047,906
Number of Sequences: 2352
Number of extensions: 21869
Number of successful extensions: 49
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 145922679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)