Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_A05
(1272 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY102668-1|AAM27497.1| 432|Drosophila melanogaster GM02466p pro... 427 e-119
AE014298-2148|AAF48453.1| 432|Drosophila melanogaster CG11654-P... 427 e-119
X95636-1|CAA64892.1| 431|Drosophila melanogaster S-adenosyl-L-h... 425 e-119
BT010277-1|AAQ23595.1| 521|Drosophila melanogaster RE06911p pro... 286 4e-77
AE014296-509|AAF47685.1| 521|Drosophila melanogaster CG9977-PA ... 286 4e-77
U31961-1|AAA84400.1| 504|Drosophila melanogaster S-adenosylhomo... 280 3e-75
AY113501-1|AAM29506.1| 492|Drosophila melanogaster RE58316p pro... 280 3e-75
AE014297-2278|AAS65160.1| 504|Drosophila melanogaster CG8956-PD... 280 3e-75
AE014297-2277|AAF55367.2| 492|Drosophila melanogaster CG8956-PC... 280 3e-75
X13168-1|CAA31566.1| 527|Drosophila melanogaster S-adenosylhomo... 278 1e-74
BT023104-1|AAY55520.1| 630|Drosophila melanogaster IP03724p pro... 79 1e-14
AY058503-1|AAL13732.1| 627|Drosophila melanogaster LD21207p pro... 34 0.48
AE014297-4718|AAF57128.1| 641|Drosophila melanogaster CG18729-P... 34 0.48
>AY102668-1|AAM27497.1| 432|Drosophila melanogaster GM02466p protein.
Length = 432
Score = 427 bits (1051), Expect = e-119
Identities = 200/272 (73%), Positives = 228/272 (83%), Gaps = 2/272 (0%)
Frame = +2
Query: 200 PPYKIADEXLAEWGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLI 379
P YK+AD LAEWGRK I++AE EMPGLMACR+KY P+K LKGARI G LHMTVQTAVLI
Sbjct: 4 PSYKVADISLAEWGRKAIIIAENEMPGLMACRKKYGPSKPLKGARITGCLHMTVQTAVLI 63
Query: 380 ETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGK 559
ETL+ELGA+VQWSS NI+STQD AAAA+ A G+P+YAWKGETD+EY+WCIEQTL+FPDG+
Sbjct: 64 ETLVELGAQVQWSSCNIFSTQDNAAAAIAATGVPVYAWKGETDEEYMWCIEQTLVFPDGQ 123
Query: 560 PLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDS 739
PLNMILDDGGDLTNLVH K+P LK++KG++EETTTGVHNLYKMF+EG L VPAINVNDS
Sbjct: 124 PLNMILDDGGDLTNLVHEKFPQYLKNIKGLSEETTTGVHNLYKMFKEGRLGVPAINVNDS 183
Query: 740 VTKSKFDNLYGCRESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKGLA--VE*SL 913
VTKSKFDNLYGCRESL+DGIKRATD+MIAGKVC VAGYGDVGKGCAQA KG V +
Sbjct: 184 VTKSKFDNLYGCRESLIDGIKRATDVMIAGKVCCVAGYGDVGKGCAQALKGFGGRVIVTE 243
Query: 914 PKSIHQRTSGRNGRFQVTTMEEAXXVGQILXT 1009
I+ + G ++VTTMEEA I T
Sbjct: 244 VDPINALQAAMEG-YEVTTMEEASKEASIFVT 274
>AE014298-2148|AAF48453.1| 432|Drosophila melanogaster CG11654-PA
protein.
Length = 432
Score = 427 bits (1051), Expect = e-119
Identities = 200/272 (73%), Positives = 228/272 (83%), Gaps = 2/272 (0%)
Frame = +2
Query: 200 PPYKIADEXLAEWGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLI 379
P YK+AD LAEWGRK I++AE EMPGLMACR+KY P+K LKGARI G LHMTVQTAVLI
Sbjct: 4 PSYKVADISLAEWGRKAIIIAENEMPGLMACRKKYGPSKPLKGARITGCLHMTVQTAVLI 63
Query: 380 ETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGK 559
ETL+ELGA+VQWSS NI+STQD AAAA+ A G+P+YAWKGETD+EY+WCIEQTL+FPDG+
Sbjct: 64 ETLVELGAQVQWSSCNIFSTQDNAAAAIAATGVPVYAWKGETDEEYMWCIEQTLVFPDGQ 123
Query: 560 PLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDS 739
PLNMILDDGGDLTNLVH K+P LK++KG++EETTTGVHNLYKMF+EG L VPAINVNDS
Sbjct: 124 PLNMILDDGGDLTNLVHEKFPQYLKNIKGLSEETTTGVHNLYKMFKEGRLGVPAINVNDS 183
Query: 740 VTKSKFDNLYGCRESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKGLA--VE*SL 913
VTKSKFDNLYGCRESL+DGIKRATD+MIAGKVC VAGYGDVGKGCAQA KG V +
Sbjct: 184 VTKSKFDNLYGCRESLIDGIKRATDVMIAGKVCCVAGYGDVGKGCAQALKGFGGRVIVTE 243
Query: 914 PKSIHQRTSGRNGRFQVTTMEEAXXVGQILXT 1009
I+ + G ++VTTMEEA I T
Sbjct: 244 VDPINALQAAMEG-YEVTTMEEASKEASIFVT 274
>X95636-1|CAA64892.1| 431|Drosophila melanogaster
S-adenosyl-L-homocysteine hydrolaseprotein.
Length = 431
Score = 425 bits (1048), Expect = e-119
Identities = 199/272 (73%), Positives = 227/272 (83%), Gaps = 2/272 (0%)
Frame = +2
Query: 200 PPYKIADEXLAEWGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLI 379
P YK+AD LAEWGRK I++AE EMPGLMACR+KY P+K LKGARI G LHMTVQTAVLI
Sbjct: 4 PSYKVADISLAEWGRKAIIIAENEMPGLMACRKKYGPSKPLKGARITGCLHMTVQTAVLI 63
Query: 380 ETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGK 559
ETL+ELGA+VQWSS NI+STQD AAAA+ A G+P+YAWKGETD+EY+WCIEQTL+FPDG+
Sbjct: 64 ETLVELGAQVQWSSCNIFSTQDNAAAAIAATGVPVYAWKGETDEEYMWCIEQTLVFPDGQ 123
Query: 560 PLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDS 739
PLNMILDDGGDLTNLVH K+P LK++KG++EETTTGVHNLYKMF+EG L VPAINVNDS
Sbjct: 124 PLNMILDDGGDLTNLVHEKFPQFLKNIKGLSEETTTGVHNLYKMFKEGRLGVPAINVNDS 183
Query: 740 VTKSKFDNLYGCRESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKGLA--VE*SL 913
VTKSKFDNLYGCRESL+DGIKRATD+MIAGKVC VAGYGDVGKGCAQA KG V +
Sbjct: 184 VTKSKFDNLYGCRESLIDGIKRATDVMIAGKVCCVAGYGDVGKGCAQALKGFGGRVIVTE 243
Query: 914 PKSIHQRTSGRNGRFQVTTMEEAXXVGQILXT 1009
I+ + G ++VTTMEE I T
Sbjct: 244 VDPINALQAAMEG-YEVTTMEEGSKEASIFVT 274
>BT010277-1|AAQ23595.1| 521|Drosophila melanogaster RE06911p
protein.
Length = 521
Score = 286 bits (702), Expect = 4e-77
Identities = 131/219 (59%), Positives = 172/219 (78%)
Frame = +2
Query: 236 WGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIETLIELGAEVQW 415
+GR+ I +AE+EMPG++A +++ A K LK A+I G H+ QTAVLIETL+ELGA V+W
Sbjct: 106 FGRREIEIAEQEMPGIIALKKRAAEDKPLKDAKIVGCTHINAQTAVLIETLVELGASVRW 165
Query: 416 SSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPLNMILDDGGDL 595
++ NIYSTQ+E AAAL GIPI+AW+GET++++ WCI++ + + +P NMILDDGGD
Sbjct: 166 AACNIYSTQNEVAAALAESGIPIFAWRGETEEDFWWCIDRCVNAENWQP-NMILDDGGDA 224
Query: 596 TNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGC 775
T+L+ KYP + K VKGI EE+ TGVH LY++ + G L VPA+NVNDSVTK+KFDNLY C
Sbjct: 225 THLMLKKYPTMFKLVKGIVEESVTGVHRLYQLSKAGKLTVPAMNVNDSVTKTKFDNLYSC 284
Query: 776 RESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKG 892
+ES+LD +KR+TD+M GK VV GYGDVGKGCAQA KG
Sbjct: 285 KESILDSLKRSTDVMFGGKQVVVCGYGDVGKGCAQALKG 323
>AE014296-509|AAF47685.1| 521|Drosophila melanogaster CG9977-PA
protein.
Length = 521
Score = 286 bits (702), Expect = 4e-77
Identities = 131/219 (59%), Positives = 172/219 (78%)
Frame = +2
Query: 236 WGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIETLIELGAEVQW 415
+GR+ I +AE+EMPG++A +++ A K LK A+I G H+ QTAVLIETL+ELGA V+W
Sbjct: 106 FGRREIEIAEQEMPGIIALKKRAAEDKPLKDAKIVGCTHINAQTAVLIETLVELGASVRW 165
Query: 416 SSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPLNMILDDGGDL 595
++ NIYSTQ+E AAAL GIPI+AW+GET++++ WCI++ + + +P NMILDDGGD
Sbjct: 166 AACNIYSTQNEVAAALAESGIPIFAWRGETEEDFWWCIDRCVNAENWQP-NMILDDGGDA 224
Query: 596 TNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGC 775
T+L+ KYP + K VKGI EE+ TGVH LY++ + G L VPA+NVNDSVTK+KFDNLY C
Sbjct: 225 THLMLKKYPTMFKLVKGIVEESVTGVHRLYQLSKAGKLTVPAMNVNDSVTKTKFDNLYSC 284
Query: 776 RESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKG 892
+ES+LD +KR+TD+M GK VV GYGDVGKGCAQA KG
Sbjct: 285 KESILDSLKRSTDVMFGGKQVVVCGYGDVGKGCAQALKG 323
>U31961-1|AAA84400.1| 504|Drosophila melanogaster
S-adenosylhomocysteine hydrolase protein.
Length = 504
Score = 280 bits (687), Expect = 3e-75
Identities = 127/219 (57%), Positives = 164/219 (74%)
Frame = +2
Query: 236 WGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIETLIELGAEVQW 415
+GR+ I +AE EMPG+M R++ K LKGA I G H+ Q+AVLIETL++LGA V+W
Sbjct: 78 FGRREIEIAESEMPGIMTLRKRAKDEKPLKGANIVGCTHVNAQSAVLIETLVQLGATVRW 137
Query: 416 SSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPLNMILDDGGDL 595
++ NIYSTQ+ AAAL GIPI+AW+GET++E+ WC+++ I+ DG N+ILDDGGD
Sbjct: 138 AACNIYSTQNAVAAALAEAGIPIFAWRGETEEEFWWCLDRA-IYSDGWQPNLILDDGGDA 196
Query: 596 TNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGC 775
T+L+ KYPD K ++GI EE+ TGVH LY + + G L VPAINVNDSVTK+KFD Y C
Sbjct: 197 THLMLKKYPDYFKAIRGIVEESVTGVHRLYMLSKGGKLTVPAINVNDSVTKNKFDTFYTC 256
Query: 776 RESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKG 892
R+S+LD +KR TDIM GK V+ GYGDVGKGCAQ+ KG
Sbjct: 257 RDSILDSLKRTTDIMFGGKQVVICGYGDVGKGCAQSLKG 295
>AY113501-1|AAM29506.1| 492|Drosophila melanogaster RE58316p
protein.
Length = 492
Score = 280 bits (687), Expect = 3e-75
Identities = 127/219 (57%), Positives = 164/219 (74%)
Frame = +2
Query: 236 WGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIETLIELGAEVQW 415
+GR+ I +AE EMPG+M R++ K LKGA I G H+ Q+AVLIETL++LGA V+W
Sbjct: 78 FGRREIEIAESEMPGIMTLRKRAKDEKPLKGANIVGCTHVNAQSAVLIETLVQLGATVRW 137
Query: 416 SSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPLNMILDDGGDL 595
++ NIYSTQ+ AAAL GIPI+AW+GET++E+ WC+++ I+ DG N+ILDDGGD
Sbjct: 138 AACNIYSTQNAVAAALAEAGIPIFAWRGETEEEFWWCLDRA-IYSDGWQPNLILDDGGDA 196
Query: 596 TNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGC 775
T+L+ KYPD K ++GI EE+ TGVH LY + + G L VPAINVNDSVTK+KFD Y C
Sbjct: 197 THLMLKKYPDYFKAIRGIVEESVTGVHRLYMLSKGGKLTVPAINVNDSVTKNKFDTFYTC 256
Query: 776 RESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKG 892
R+S+LD +KR TDIM GK V+ GYGDVGKGCAQ+ KG
Sbjct: 257 RDSILDSLKRTTDIMFGGKQVVICGYGDVGKGCAQSLKG 295
>AE014297-2278|AAS65160.1| 504|Drosophila melanogaster CG8956-PD,
isoform D protein.
Length = 504
Score = 280 bits (687), Expect = 3e-75
Identities = 127/219 (57%), Positives = 164/219 (74%)
Frame = +2
Query: 236 WGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIETLIELGAEVQW 415
+GR+ I +AE EMPG+M R++ K LKGA I G H+ Q+AVLIETL++LGA V+W
Sbjct: 78 FGRREIEIAESEMPGIMTLRKRAKDEKPLKGANIVGCTHVNAQSAVLIETLVQLGATVRW 137
Query: 416 SSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPLNMILDDGGDL 595
++ NIYSTQ+ AAAL GIPI+AW+GET++E+ WC+++ I+ DG N+ILDDGGD
Sbjct: 138 AACNIYSTQNAVAAALAEAGIPIFAWRGETEEEFWWCLDRA-IYSDGWQPNLILDDGGDA 196
Query: 596 TNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGC 775
T+L+ KYPD K ++GI EE+ TGVH LY + + G L VPAINVNDSVTK+KFD Y C
Sbjct: 197 THLMLKKYPDYFKAIRGIVEESVTGVHRLYMLSKGGKLTVPAINVNDSVTKNKFDTFYTC 256
Query: 776 RESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKG 892
R+S+LD +KR TDIM GK V+ GYGDVGKGCAQ+ KG
Sbjct: 257 RDSILDSLKRTTDIMFGGKQVVICGYGDVGKGCAQSLKG 295
>AE014297-2277|AAF55367.2| 492|Drosophila melanogaster CG8956-PC,
isoform C protein.
Length = 492
Score = 280 bits (687), Expect = 3e-75
Identities = 127/219 (57%), Positives = 164/219 (74%)
Frame = +2
Query: 236 WGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIETLIELGAEVQW 415
+GR+ I +AE EMPG+M R++ K LKGA I G H+ Q+AVLIETL++LGA V+W
Sbjct: 78 FGRREIEIAESEMPGIMTLRKRAKDEKPLKGANIVGCTHVNAQSAVLIETLVQLGATVRW 137
Query: 416 SSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPLNMILDDGGDL 595
++ NIYSTQ+ AAAL GIPI+AW+GET++E+ WC+++ I+ DG N+ILDDGGD
Sbjct: 138 AACNIYSTQNAVAAALAEAGIPIFAWRGETEEEFWWCLDRA-IYSDGWQPNLILDDGGDA 196
Query: 596 TNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGC 775
T+L+ KYPD K ++GI EE+ TGVH LY + + G L VPAINVNDSVTK+KFD Y C
Sbjct: 197 THLMLKKYPDYFKAIRGIVEESVTGVHRLYMLSKGGKLTVPAINVNDSVTKNKFDTFYTC 256
Query: 776 RESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKG 892
R+S+LD +KR TDIM GK V+ GYGDVGKGCAQ+ KG
Sbjct: 257 RDSILDSLKRTTDIMFGGKQVVICGYGDVGKGCAQSLKG 295
>X13168-1|CAA31566.1| 527|Drosophila melanogaster
S-adenosylhomocysteine hydrolase protein.
Length = 527
Score = 278 bits (682), Expect = 1e-74
Identities = 126/219 (57%), Positives = 163/219 (74%)
Frame = +2
Query: 236 WGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIETLIELGAEVQW 415
+GR+ I +AE EMPG+M R++ K LKGA I G H+ Q+AVLIE L++LGA V+W
Sbjct: 78 FGRREIEIAESEMPGIMTLRKRAKDEKPLKGANIVGCTHVNAQSAVLIEALVQLGATVRW 137
Query: 416 SSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPLNMILDDGGDL 595
++ NIYSTQ+ AAAL GIPI+AW+GET++E+ WC+++ I+ DG N+ILDDGGD
Sbjct: 138 AACNIYSTQNAVAAALAEAGIPIFAWRGETEEEFWWCLDRA-IYSDGWQPNLILDDGGDA 196
Query: 596 TNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGC 775
T+L+ KYPD K ++GI EE+ TGVH LY + + G L VPAINVNDSVTK+KFD Y C
Sbjct: 197 THLMLKKYPDYFKAIRGIVEESVTGVHRLYMLSKGGKLTVPAINVNDSVTKNKFDTFYTC 256
Query: 776 RESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKG 892
R+S+LD +KR TDIM GK V+ GYGDVGKGCAQ+ KG
Sbjct: 257 RDSILDSLKRTTDIMFGGKQVVICGYGDVGKGCAQSLKG 295
>BT023104-1|AAY55520.1| 630|Drosophila melanogaster IP03724p
protein.
Length = 630
Score = 79.0 bits (186), Expect = 1e-14
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +2
Query: 200 PPYKIADEXLAEWGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLI 379
P YK+AD LAEWGRK I++AE EMPGLMACR+KY P+K LKGARI ++ ++
Sbjct: 26 PSYKVADISLAEWGRKAIIIAENEMPGLMACRKKYGPSKPLKGARITVCYRLSSKSDSKA 85
Query: 380 ETLIE 394
+ L+E
Sbjct: 86 KALME 90
>AY058503-1|AAL13732.1| 627|Drosophila melanogaster LD21207p
protein.
Length = 627
Score = 33.9 bits (74), Expect = 0.48
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +2
Query: 173 SQTLYYKMXPPYKIADEXLAEWGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLH 352
S T+ Y P Y ++ AE G+K +++ +++ G +A R + P + + L
Sbjct: 7 SYTITYGAPPTYLVSMVGAAEAGKKIVLVFKEDRNGAVA-RLRTTPTRAAPKKEGSADLD 65
Query: 353 MT---VQTAVLIETLIELGAEVQWSSSNIYSTQDE 448
+T ++ L++ + +L ++Q SN + ++E
Sbjct: 66 LTGSPLKDDCLVDAIADLSIDLQLDHSNPWKLEEE 100
>AE014297-4718|AAF57128.1| 641|Drosophila melanogaster CG18729-PA
protein.
Length = 641
Score = 33.9 bits (74), Expect = 0.48
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +2
Query: 173 SQTLYYKMXPPYKIADEXLAEWGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLH 352
S T+ Y P Y ++ AE G+K +++ +++ G +A R + P + + L
Sbjct: 21 SYTITYGAPPTYLVSMVGAAEAGKKIVLVFKEDRNGAVA-RLRTTPTRAAPKKEGSADLD 79
Query: 353 MT---VQTAVLIETLIELGAEVQWSSSNIYSTQDE 448
+T ++ L++ + +L ++Q SN + ++E
Sbjct: 80 LTGSPLKDDCLVDAIADLSIDLQLDHSNPWKLEEE 114
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,184,070
Number of Sequences: 53049
Number of extensions: 922801
Number of successful extensions: 1970
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1955
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6845363280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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