Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_A05
(1272 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 379 e-105
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 379 e-105
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 379 e-105
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 29 5.3
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 29 7.0
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 379 bits (932), Expect = e-105
Identities = 185/272 (68%), Positives = 215/272 (79%), Gaps = 2/272 (0%)
Frame = +2
Query: 200 PPYKIADEXLAEWGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLI 379
P YK+AD LA++GRK I+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVLI
Sbjct: 6 PAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLI 65
Query: 380 ETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGK 559
ETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG+
Sbjct: 66 ETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQ 125
Query: 560 PLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDS 739
PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVNDS
Sbjct: 126 PLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVNDS 185
Query: 740 VTKSKFDNLYGCRESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFK--GLAVE*SL 913
VTKSKFDNLYG RESL DGIKRATD+M+AGKV VVAGYGDVGKG A + K G V +
Sbjct: 186 VTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTE 245
Query: 914 PKSIHQRTSGRNGRFQVTTMEEAXXVGQILXT 1009
I+ + G ++VTT+EEA I+ T
Sbjct: 246 IDPINALQAAMEG-YEVTTLEEAAPKANIIVT 276
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 379 bits (932), Expect = e-105
Identities = 185/272 (68%), Positives = 215/272 (79%), Gaps = 2/272 (0%)
Frame = +2
Query: 200 PPYKIADEXLAEWGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLI 379
P YK+AD LA++GRK I+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVLI
Sbjct: 6 PAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLI 65
Query: 380 ETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGK 559
ETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG+
Sbjct: 66 ETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQ 125
Query: 560 PLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDS 739
PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVNDS
Sbjct: 126 PLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVNDS 185
Query: 740 VTKSKFDNLYGCRESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFK--GLAVE*SL 913
VTKSKFDNLYG RESL DGIKRATD+M+AGKV VVAGYGDVGKG A + K G V +
Sbjct: 186 VTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTE 245
Query: 914 PKSIHQRTSGRNGRFQVTTMEEAXXVGQILXT 1009
I+ + G ++VTT+EEA I+ T
Sbjct: 246 IDPINALQAAMEG-YEVTTLEEAAPKANIIVT 276
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 379 bits (932), Expect = e-105
Identities = 185/272 (68%), Positives = 215/272 (79%), Gaps = 2/272 (0%)
Frame = +2
Query: 200 PPYKIADEXLAEWGRKXIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLI 379
P YK+AD LA++GRK I+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVLI
Sbjct: 6 PAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLI 65
Query: 380 ETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGK 559
ETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG+
Sbjct: 66 ETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQ 125
Query: 560 PLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDS 739
PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVNDS
Sbjct: 126 PLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVNDS 185
Query: 740 VTKSKFDNLYGCRESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFK--GLAVE*SL 913
VTKSKFDNLYG RESL DGIKRATD+M+AGKV VVAGYGDVGKG A + K G V +
Sbjct: 186 VTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTE 245
Query: 914 PKSIHQRTSGRNGRFQVTTMEEAXXVGQILXT 1009
I+ + G ++VTT+EEA I+ T
Sbjct: 246 IDPINALQAAMEG-YEVTTLEEAAPKANIIVT 276
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 460 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 302
C CG+++ I N+TA Y +N L + + G+ F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 620 PDLLKDVKGITEETTTGVHNL 682
PDL DVK +TEE T VH+L
Sbjct: 316 PDLEDDVKFLTEELTLSVHDL 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,714,777
Number of Sequences: 27780
Number of extensions: 477727
Number of successful extensions: 1142
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3547715720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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