Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_A04
(1338 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.086
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.086
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.086
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.15
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.15
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.20
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 34 0.20
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 1.1
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 31 1.8
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 31 1.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 2.4
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 7.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 7.4
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 7.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 7.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 7.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 7.4
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 9.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 9.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 9.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.086
Identities = 34/128 (26%), Positives = 37/128 (28%)
Frame = -3
Query: 706 PPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPP 527
PP G P P PPP G P +P PP GG + PP
Sbjct: 241 PPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 526 PXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXIXGPX 347
P P P G P P PP G P PP+ P
Sbjct: 299 PPP---------------PPRGSPPTGSLPP-PQAGGSPPPAGTGSPPPPPRQ-KRQAPE 341
Query: 346 XPPPXGXP 323
PP G P
Sbjct: 342 RSPPTGSP 349
Score = 33.9 bits (74), Expect = 0.26
Identities = 30/120 (25%), Positives = 32/120 (26%)
Frame = -3
Query: 694 GXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPPPXPX 515
G PP PPP P +P PP G PPP P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS---------PPPPPT 277
Query: 514 KKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXIXGPXXPPP 335
+ P G P P P S PP G P P G PPP
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG----TGSPPPPP 333
Score = 33.9 bits (74), Expect = 0.26
Identities = 25/90 (27%), Positives = 28/90 (31%)
Frame = -3
Query: 706 PPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPP 527
PP G P PP PPP G P P PP GG PP
Sbjct: 274 PPPTGSPPPPPAG--GSPPPPRAGSPPPPPPPRGSPPTGSLP-PPQAGGSPPPAGTGSPP 330
Query: 526 PXPXKKKKXXXXXXNFFXPXXGXPKKPXXP 437
P P +K++ P G P P
Sbjct: 331 PPPRQKRQAPERSPPTGSPPTGSPPTGRPP 360
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -3
Query: 538 PXPPPXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXI 359
P PPP P P G P P + PP G P PP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP-------RTGSPPPPPTGSPPPPP----A 285
Query: 358 XGPXXPPPXGXPXPP 314
G PP G P PP
Sbjct: 286 GGSPPPPRAGSPPPP 300
Score = 28.7 bits (61), Expect = 9.8
Identities = 21/68 (30%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = -3
Query: 718 SXXXPPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKP 539
S PP G P PP PPP G P+ +P PP R P
Sbjct: 254 SPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP----PRGSP 307
Query: 538 P---XPPP 524
P PPP
Sbjct: 308 PTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.086
Identities = 34/128 (26%), Positives = 37/128 (28%)
Frame = -3
Query: 706 PPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPP 527
PP G P P PPP G P +P PP GG + PP
Sbjct: 262 PPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 526 PXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXIXGPX 347
P P P G P P PP G P PP+ P
Sbjct: 320 PPP---------------PPRGSPPTGSLPP-PQAGGSPPPAGTGSPPPPPRQ-KRQAPE 362
Query: 346 XPPPXGXP 323
PP G P
Sbjct: 363 RSPPTGSP 370
Score = 33.9 bits (74), Expect = 0.26
Identities = 30/120 (25%), Positives = 32/120 (26%)
Frame = -3
Query: 694 GXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPPPXPX 515
G PP PPP P +P PP G PPP P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS---------PPPPPT 298
Query: 514 KKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXIXGPXXPPP 335
+ P G P P P S PP G P P G PPP
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG----TGSPPPPP 354
Score = 33.9 bits (74), Expect = 0.26
Identities = 25/90 (27%), Positives = 28/90 (31%)
Frame = -3
Query: 706 PPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPP 527
PP G P PP PPP G P P PP GG PP
Sbjct: 295 PPPTGSPPPPPAG--GSPPPPRAGSPPPPPPPRGSPPTGSLP-PPQAGGSPPPAGTGSPP 351
Query: 526 PXPXKKKKXXXXXXNFFXPXXGXPKKPXXP 437
P P +K++ P G P P
Sbjct: 352 PPPRQKRQAPERSPPTGSPPTGSPPTGRPP 381
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -3
Query: 538 PXPPPXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXI 359
P PPP P P G P P + PP G P PP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP-------RTGSPPPPPTGSPPPPP----A 306
Query: 358 XGPXXPPPXGXPXPP 314
G PP G P PP
Sbjct: 307 GGSPPPPRAGSPPPP 321
Score = 28.7 bits (61), Expect = 9.8
Identities = 21/68 (30%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = -3
Query: 718 SXXXPPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKP 539
S PP G P PP PPP G P+ +P PP R P
Sbjct: 275 SPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP----PRGSP 328
Query: 538 P---XPPP 524
P PPP
Sbjct: 329 PTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.086
Identities = 34/128 (26%), Positives = 37/128 (28%)
Frame = -3
Query: 706 PPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPP 527
PP G P P PPP G P +P PP GG + PP
Sbjct: 247 PPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 526 PXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXIXGPX 347
P P P G P P PP G P PP+ P
Sbjct: 305 PPP---------------PPRGSPPTGSLPP-PQAGGSPPPAGTGSPPPPPRQ-KRQAPE 347
Query: 346 XPPPXGXP 323
PP G P
Sbjct: 348 RSPPTGSP 355
Score = 33.9 bits (74), Expect = 0.26
Identities = 30/120 (25%), Positives = 32/120 (26%)
Frame = -3
Query: 694 GXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPPPXPX 515
G PP PPP P +P PP G PPP P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGS---------PPPPPT 283
Query: 514 KKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXIXGPXXPPP 335
+ P G P P P S PP G P P G PPP
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG----TGSPPPPP 339
Score = 33.9 bits (74), Expect = 0.26
Identities = 25/90 (27%), Positives = 28/90 (31%)
Frame = -3
Query: 706 PPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPP 527
PP G P PP PPP G P P PP GG PP
Sbjct: 280 PPPTGSPPPPPAG--GSPPPPRAGSPPPPPPPRGSPPTGSLP-PPQAGGSPPPAGTGSPP 336
Query: 526 PXPXKKKKXXXXXXNFFXPXXGXPKKPXXP 437
P P +K++ P G P P
Sbjct: 337 PPPRQKRQAPERSPPTGSPPTGSPPTGRPP 366
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -3
Query: 538 PXPPPXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXI 359
P PPP P P G P P + PP G P PP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP-------RTGSPPPPPTGSPPPPP----A 291
Query: 358 XGPXXPPPXGXPXPP 314
G PP G P PP
Sbjct: 292 GGSPPPPRAGSPPPP 306
Score = 28.7 bits (61), Expect = 9.8
Identities = 21/68 (30%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = -3
Query: 718 SXXXPPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKP 539
S PP G P PP PPP G P+ +P PP R P
Sbjct: 260 SPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP----PRGSP 313
Query: 538 P---XPPP 524
P PPP
Sbjct: 314 PTGSLPPP 321
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.15
Identities = 35/131 (26%), Positives = 40/131 (30%), Gaps = 6/131 (4%)
Frame = -3
Query: 688 PXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPPPXPXKK 509
P PP PPP G P+ P PP G + PP PPP P +
Sbjct: 262 PVPPPPPSVTPMPPPMPPTP-------GMTPR---PPPPPSSGMW----PPPPPPPPGRT 307
Query: 508 KKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXX---GXXPXPPKXFXIXGP---X 347
P P + P PP G P PP + GP
Sbjct: 308 PGPPGMPG---MPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP 364
Query: 346 XPPPXGXPXPP 314
PPP P PP
Sbjct: 365 PPPPSRPPAPP 375
Score = 34.3 bits (75), Expect = 0.20
Identities = 23/78 (29%), Positives = 26/78 (33%)
Frame = -3
Query: 541 PPXPPPXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFX 362
PP PPP P P G +P P S PP G P PP
Sbjct: 261 PPVPPPPPSVTPMPPP-----MPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP---G 312
Query: 361 IXGPXXPPPXGXPXPPXL 308
+ G PPP PP +
Sbjct: 313 MPGMPPPPPPSRFGPPGM 330
Score = 31.1 bits (67), Expect = 1.8
Identities = 31/121 (25%), Positives = 32/121 (26%), Gaps = 4/121 (3%)
Frame = -3
Query: 688 PXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPPPX---- 521
P PP PPP P TP PP G PP PPP
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPP--PPGRTPGPPGMPGM-----PPPPPPSRFGP 327
Query: 520 PXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXIXGPXXP 341
P P G P P S PP P PP + P P
Sbjct: 328 PGMGGMPPPPPPGMRYPG-GMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Query: 340 P 338
P
Sbjct: 387 P 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.15
Identities = 35/131 (26%), Positives = 40/131 (30%), Gaps = 6/131 (4%)
Frame = -3
Query: 688 PXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPPPXPXKK 509
P PP PPP G P+ P PP G + PP PPP P +
Sbjct: 272 PVPPPPPSVTPMPPPMPPTP-------GMTPR---PPPPPSSGMW----PPPPPPPPGRT 317
Query: 508 KKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXX---GXXPXPPKXFXIXGP---X 347
P P + P PP G P PP + GP
Sbjct: 318 PGPPGMPG---MPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYP 374
Query: 346 XPPPXGXPXPP 314
PPP P PP
Sbjct: 375 PPPPSRPPAPP 385
Score = 34.3 bits (75), Expect = 0.20
Identities = 23/78 (29%), Positives = 26/78 (33%)
Frame = -3
Query: 541 PPXPPPXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFX 362
PP PPP P P G +P P S PP G P PP
Sbjct: 271 PPVPPPPPSVTPMPPP-----MPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP---G 322
Query: 361 IXGPXXPPPXGXPXPPXL 308
+ G PPP PP +
Sbjct: 323 MPGMPPPPPPSRFGPPGM 340
Score = 31.1 bits (67), Expect = 1.8
Identities = 31/121 (25%), Positives = 32/121 (26%), Gaps = 4/121 (3%)
Frame = -3
Query: 688 PXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPPPX---- 521
P PP PPP P TP PP G PP PPP
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPP--PPGRTPGPPGMPGM-----PPPPPPSRFGP 337
Query: 520 PXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXIXGPXXP 341
P P G P P S PP P PP + P P
Sbjct: 338 PGMGGMPPPPPPGMRYPG-GMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Query: 340 P 338
P
Sbjct: 397 P 397
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.20
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 407 PXFXXGXPXPPKXFXNXGXPXPPPXXXTPPPXP 309
P F G P PP G P PPP PPP P
Sbjct: 88 PMFAGGIPPPPPMMG--GIPPPPPMFGAPPPPP 118
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = -3
Query: 481 FFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXIXGPXXPPPXG---XPXPP 314
F P G P P PP G P PP F P PPP G P PP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP-PPPPPPSGLGVAPQPP 130
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -2
Query: 407 PXFXXGXPXPPKXFXNXGXPXPPPXXXTPPPXP 309
P G P PP F P PP PPP P
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.3 bits (75), Expect = 0.20
Identities = 22/72 (30%), Positives = 24/72 (33%)
Frame = -3
Query: 718 SXXXPPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKP 539
S PP P PP PPP G P P PP P
Sbjct: 1334 SSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGV-PLPVPPPPPLFSPSMIL--P 1390
Query: 538 PXPPPXPXKKKK 503
P PPP P ++KK
Sbjct: 1391 PPPPPLPSEEKK 1402
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = -3
Query: 718 SXXXPPXXGXPXXPPXXXX--KXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRX 545
S PP G P PP PPP G P PP GG
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG----- 757
Query: 544 KPPXPPPXP 518
PP PPP P
Sbjct: 758 -PPPPPPPP 765
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/92 (29%), Positives = 27/92 (29%), Gaps = 4/92 (4%)
Frame = -3
Query: 577 PPXXGGFFXRXKPPXPPPXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXX 398
PP GG PP P P P G P P P PP
Sbjct: 707 PPITGG-----PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG------LPPIS 755
Query: 397 XGXXPXPPKXFXIXGPXXPPP----XGXPXPP 314
G P PP P PPP G P PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -3
Query: 706 PPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPP 527
PP G P PP PP G P P PP GGF + PP PP
Sbjct: 736 PPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPP--GGF--KGGPPPPP 788
Query: 526 P 524
P
Sbjct: 789 P 789
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/90 (28%), Positives = 26/90 (28%), Gaps = 3/90 (3%)
Frame = -3
Query: 583 PXPPXXGGFFXRXKPPXPPPXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPP 404
P PP GG P PPP P P G P P P PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 403 XXXGXXPXPPKXFXIXGPXXP---PPXGXP 323
P PP F P P PP P
Sbjct: 787 ------PPPPGMFAPMAPVIPDYLPPKKVP 810
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = -3
Query: 718 SXXXPPXXGXPXXPPXXXX--KXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRX 545
S PP G P PP PPP G P PP GG
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG----- 757
Query: 544 KPPXPPPXP 518
PP PPP P
Sbjct: 758 -PPPPPPPP 765
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/92 (29%), Positives = 27/92 (29%), Gaps = 4/92 (4%)
Frame = -3
Query: 577 PPXXGGFFXRXKPPXPPPXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXX 398
PP GG PP P P P G P P P PP
Sbjct: 707 PPITGG-----PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG------LPPIS 755
Query: 397 XGXXPXPPKXFXIXGPXXPPP----XGXPXPP 314
G P PP P PPP G P PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -3
Query: 706 PPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPP 527
PP G P PP PP G P P PP GGF + PP PP
Sbjct: 736 PPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPP--GGF--KGGPPPPP 788
Query: 526 P 524
P
Sbjct: 789 P 789
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/90 (28%), Positives = 26/90 (28%), Gaps = 3/90 (3%)
Frame = -3
Query: 583 PXPPXXGGFFXRXKPPXPPPXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPP 404
P PP GG P PPP P P G P P P PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 403 XXXGXXPXPPKXFXIXGPXXP---PPXGXP 323
P PP F P P PP P
Sbjct: 787 ------PPPPGMFAPMAPVIPDYLPPKKVP 810
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = -3
Query: 718 SXXXPPXXGXPXXPPXXXX--KXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRX 545
S PP G P PP PPP G P PP GG
Sbjct: 286 SSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGG----- 340
Query: 544 KPPXPPPXP 518
PP PPP P
Sbjct: 341 -PPPPPPPP 348
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/92 (29%), Positives = 27/92 (29%), Gaps = 4/92 (4%)
Frame = -3
Query: 577 PPXXGGFFXRXKPPXPPPXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXX 398
PP GG PP P P P G P P P PP
Sbjct: 290 PPITGG-----PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG------LPPIS 338
Query: 397 XGXXPXPPKXFXIXGPXXPPP----XGXPXPP 314
G P PP P PPP G P PP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -3
Query: 706 PPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPP 527
PP G P PP PP G P P PP GGF + PP PP
Sbjct: 319 PPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPP--GGF--KGGPPPPP 371
Query: 526 P 524
P
Sbjct: 372 P 372
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/90 (28%), Positives = 26/90 (28%), Gaps = 3/90 (3%)
Frame = -3
Query: 583 PXPPXXGGFFXRXKPPXPPPXPXKKKKXXXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPP 404
P PP GG P PPP P P G P P P PP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 403 XXXGXXPXPPKXFXIXGPXXP---PPXGXP 323
P PP F P P PP P
Sbjct: 370 ------PPPPGMFAPMAPVIPDYLPPKKVP 393
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 31.1 bits (67), Expect = 1.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 583 PXPPXXGGFFXRXKPPXPPPXPXKKKK 503
P PP G R PP PPP P ++ +
Sbjct: 432 PAPPLQVGLVGRVPPPPPPPPPRRRSR 458
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 31.1 bits (67), Expect = 1.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 583 PXPPXXGGFFXRXKPPXPPPXPXKKKK 503
P PP G R PP PPP P ++ +
Sbjct: 380 PAPPLQVGLVGRVPPPPPPPPPRRRSR 406
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 2.4
Identities = 28/119 (23%), Positives = 30/119 (25%)
Frame = -3
Query: 679 PPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPPPXPXKKKKX 500
PP PPP G G + P P G PP P P
Sbjct: 128 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGS-----PPPPPTGEPQDLSTE 182
Query: 499 XXXXXNFFXPXXGXPKKPXXPXFSXKXXFXPPXXXGXXPXPPKXFXIXGPXXPPPXGXP 323
P G P P + P PPK G PPP G P
Sbjct: 183 GNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKG---TGSPTPPPTGEP 238
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.1 bits (62), Expect = 7.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 386 PXPPKXFXNXGXPXPPPXXXTPPPXP 309
P PP+ G P PPP PPP P
Sbjct: 780 PLPPRL--QGGIPPPPPLGIIPPPPP 803
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 613 GXGXGPQXXTPXPPXXGGFFXRXKPPXPPPXP 518
G G G P PP G PP PPP P
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 613 GXGXGPQXXTPXPPXXGGFFXRXKPPXPPPXP 518
G G G P PP G PP PPP P
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMP 683
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = -3
Query: 706 PPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPP 527
PP P PP + PPP G GP PP F PP P
Sbjct: 299 PPRGHFPPPPPHFMGRGMPPPFMPPPPH----FGMGPPRGFMPPPHPMMFRGGPYPPFFP 354
Query: 526 PXP 518
P P
Sbjct: 355 PPP 357
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = -3
Query: 706 PPXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPP 527
PP P PP + PPP G GP PP F PP P
Sbjct: 299 PPRGHFPPPPPHFMGRGMPPPFMPPPPH----FGMGPPRGFMPPPHPMMFRGGPYPPFFP 354
Query: 526 PXP 518
P P
Sbjct: 355 PPP 357
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.1 bits (62), Expect = 7.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 386 PXPPKXFXNXGXPXPPPXXXTPPPXP 309
P PP+ G P PPP PPP P
Sbjct: 780 PLPPRL--QGGIPPPPPLGIIPPPPP 803
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -2
Query: 392 GXPXPPKXFXNXGXPXPPPXXXTPPPXP 309
G P PP + P PP PPP P
Sbjct: 805 GGPRPPYPYPGGPVPPGPPQNRMPPPPP 832
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 9.8
Identities = 16/62 (25%), Positives = 16/62 (25%)
Frame = -3
Query: 703 PXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPPP 524
P G P P PPP P P P PP PPP
Sbjct: 596 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
Query: 523 XP 518
P
Sbjct: 656 PP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 9.8
Identities = 16/62 (25%), Positives = 16/62 (25%)
Frame = -3
Query: 703 PXXGXPXXPPXXXXKXXPPPXXXXXXXXXXGXGXGPQXXTPXPPXXGGFFXRXKPPXPPP 524
P G P P PPP P P P PP PPP
Sbjct: 422 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
Query: 523 XP 518
P
Sbjct: 482 PP 483
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,197,965
Number of Sequences: 27780
Number of extensions: 259676
Number of successful extensions: 1686
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3756810758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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