Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_A03
         (1247 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0592 + 19064025-19066596,19067036-19067084,19068530-190686...    33   0.62 
03_05_0712 - 27057858-27057941,27058093-27058182,27058268-270583...    32   0.82 
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397...    30   3.3  
01_03_0308 - 14883728-14884120                                         30   3.3  
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341...    30   4.4  
05_07_0360 + 29542854-29542900,29542988-29543129,29543207-295445...    29   5.8  

>08_02_0592 +
           19064025-19066596,19067036-19067084,19068530-19068605,
           19068767-19068922
          Length = 950

 Score = 32.7 bits (71), Expect = 0.62
 Identities = 23/58 (39%), Positives = 26/58 (44%)
 Frame = +1

Query: 82  PCRSGWRTGGCWXGN*NREDATSPSPRGTRRNI*NESSDGGWRGESRSRPSGSCEGST 255
           P RSGW     W G+     A SP PR  R ++       GWRGE  SR  G  E  T
Sbjct: 10  PRRSGWAE---WGGD--ARPARSPPPRRRRPDV-----AAGWRGEGTSRVRGRGEKGT 57


>03_05_0712 - 27057858-27057941,27058093-27058182,27058268-27058384,
            27059759-27059866,27060314-27060406,27060499-27060669,
            27061505-27061757,27061860-27062138,27062939-27063273,
            27063364-27064332,27064711-27065182,27065243-27065291,
            27066564-27066804,27067606-27067695,27068172-27068294,
            27068365-27068418
          Length = 1175

 Score = 32.3 bits (70), Expect = 0.82
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +3

Query: 78   FAVSERLADGRVLEXELKPGGRDVAVTERNK 170
            F ++E L  GR +  EL+PGG++++VT  NK
Sbjct: 968  FTLTEELG-GRRIVHELRPGGKNISVTNENK 997


>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
            3973665-3973982,3974565-3974763,3974937-3975202,
            3975288-3975574,3976714-3977818,3977900-3978046,
            3978146-3978226,3978315-3978540,3978622-3978761,
            3979539-3979645,3979739-3979841
          Length = 3638

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 17/57 (29%), Positives = 22/57 (38%)
 Frame = +3

Query: 111  VLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVRGFHEVASSPFFS 281
            V + ELKPGGR++ VTE  K                  Q    + GF E+      S
Sbjct: 3448 VTDYELKPGGRNIRVTEETKHEYVDLVAEHILTTAIRPQINAFLEGFTELVPRELIS 3504


>01_03_0308 - 14883728-14884120
          Length = 130

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 322 SP*RGGQLTGLKPECC*NWP*QEQCFAESTTQKIRRETQWAK 447
           +P  GG + G KP     W    +C   S+   I RE +W K
Sbjct: 67  APEIGGAVAGRKPSLAELWRRHRRCSCNSSCPPIEREERWRK 108


>05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,
            3413770-3413881,3414309-3414489,3414714-3414896,
            3415133-3415315,3416062-3416131,3416413-3416522,
            3416604-3416908,3417079-3417175,3417622-3417765,
            3418217-3418303,3418387-3418473,3418566-3418706,
            3418805-3418930,3419166-3419264,3419690-3419757,
            3420275-3420341,3420713-3420883,3420959-3421048,
            3421831-3421911,3423397-3423470,3423784-3423855,
            3423925-3424017,3424138-3424204
          Length = 1030

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 20/68 (29%), Positives = 27/68 (39%)
 Frame = +3

Query: 57   LSSLEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEW 236
            +S LE  F +      G   E EL PGGRD+ VT  N                   Q+  
Sbjct: 821  ISQLELYFVIVNN-EYGEQSEEELLPGGRDMRVTSENVITYIHLVANHRLNYQIRAQSTH 879

Query: 237  LVRGFHEV 260
             +RGF ++
Sbjct: 880  FLRGFQQL 887


>05_07_0360 +
           29542854-29542900,29542988-29543129,29543207-29544529,
           29544642-29544715,29545850-29545964,29546682-29546714
          Length = 577

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +3

Query: 258 VASSPFFSPLPMLIALRGYFSFSLTWRSAHG 350
           +A+  +F  + + +AL G+  F ++WR  HG
Sbjct: 99  MAARRWFEVVDLRLALHGFLVFEVSWRDVHG 129


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,492,483
Number of Sequences: 37544
Number of extensions: 498260
Number of successful extensions: 1375
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3852724812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)