BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_A03
(1247 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1353|AAF46512.2| 437|Drosophila melanogaster CG3099-PB... 54 4e-07
BT021410-1|AAX33558.1| 1061|Drosophila melanogaster LD06566p pro... 37 0.066
AF464851-1|AAM09646.1| 1061|Drosophila melanogaster Smad-ubiquit... 37 0.066
AF416571-1|AAL09691.1| 1061|Drosophila melanogaster ubiquitin-pr... 37 0.066
AF216521-1|AAF21125.1| 1061|Drosophila melanogaster E3 ubiquitin... 37 0.066
AE013599-2520|AAF57824.3| 1061|Drosophila melanogaster CG4943-PA... 37 0.066
BT021390-1|AAX33538.1| 949|Drosophila melanogaster LD32282p pro... 32 1.4
AY069406-1|AAL39551.1| 518|Drosophila melanogaster LD10565p pro... 32 1.4
AF152865-1|AAD38975.1| 949|Drosophila melanogaster Suppressor o... 32 1.4
AE014134-334|AAN10440.1| 949|Drosophila melanogaster CG4244-PC,... 32 1.4
AE014134-333|AAF51312.1| 949|Drosophila melanogaster CG4244-PB,... 32 1.4
AE014134-332|AAF51311.1| 949|Drosophila melanogaster CG4244-PA,... 32 1.4
AY061595-1|AAL29143.1| 834|Drosophila melanogaster SD04682p pro... 32 1.9
AY058619-1|AAL13848.1| 838|Drosophila melanogaster LD31220p pro... 32 1.9
AJ278468-1|CAC42101.1| 1007|Drosophila melanogaster putative ubi... 32 1.9
AE014296-2927|AAS64973.1| 793|Drosophila melanogaster CG7555-PD... 32 1.9
AE014296-2926|AAN11695.1| 956|Drosophila melanogaster CG7555-PB... 32 1.9
AE014296-2925|AAN11694.1| 834|Drosophila melanogaster CG7555-PC... 32 1.9
AE014296-2924|AAF49328.2| 1007|Drosophila melanogaster CG7555-PA... 32 1.9
AY069489-1|AAL39634.1| 973|Drosophila melanogaster LD21888p pro... 31 2.5
AE014296-1931|AAF50078.1| 973|Drosophila melanogaster CG6190-PA... 31 2.5
AE013599-1473|AAF58519.3| 396|Drosophila melanogaster CG13158-P... 31 2.5
AY094960-1|AAM11313.1| 964|Drosophila melanogaster SD03277p pro... 31 3.3
AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB... 31 3.3
AY052069-1|AAK93493.1| 502|Drosophila melanogaster SD02279p pro... 31 4.3
AF125986-1|AAD22080.1| 704|Drosophila melanogaster putative tra... 31 4.3
AE014298-1028|AAF46251.3| 704|Drosophila melanogaster CG9653-PA... 31 4.3
AB023583-1|BAA76710.1| 704|Drosophila melanogaster Brk protein. 31 4.3
BT023500-1|AAY84900.1| 1203|Drosophila melanogaster LD29862p pro... 30 7.6
>AE014298-1353|AAF46512.2| 437|Drosophila melanogaster CG3099-PB
protein.
Length = 437
Score = 54.0 bits (124), Expect = 4e-07
Identities = 30/72 (41%), Positives = 39/72 (54%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVR 245
L TF V+E L G V++ ELKPGG+++ + E+NKK QTE LVR
Sbjct: 234 LGLTFCVTEELL-GSVVDRELKPGGKNIIINEKNKKEYLERMIKWRLERGVQEQTESLVR 292
Query: 246 GFHEVASSPFFS 281
GF+EV S S
Sbjct: 293 GFYEVIDSRLVS 304
>BT021410-1|AAX33558.1| 1061|Drosophila melanogaster LD06566p protein.
Length = 1061
Score = 36.7 bits (81), Expect = 0.066
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVR 245
+E TF+V E + G ++ ELKPGG + VTE NK+ Q L +
Sbjct: 854 IESTFSV-ENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQK 912
Query: 246 GFHEVASSPFFSP 284
GF E+ S P
Sbjct: 913 GFCELIPSHLLRP 925
>AF464851-1|AAM09646.1| 1061|Drosophila melanogaster Smad-ubiquitin E3
ligase Smurf1 protein.
Length = 1061
Score = 36.7 bits (81), Expect = 0.066
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVR 245
+E TF+V E + G ++ ELKPGG + VTE NK+ Q L +
Sbjct: 854 IESTFSV-ENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQK 912
Query: 246 GFHEVASSPFFSP 284
GF E+ S P
Sbjct: 913 GFCELIPSHLLRP 925
>AF416571-1|AAL09691.1| 1061|Drosophila melanogaster ubiquitin-protein
ligase protein.
Length = 1061
Score = 36.7 bits (81), Expect = 0.066
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVR 245
+E TF+V E + G ++ ELKPGG + VTE NK+ Q L +
Sbjct: 854 IESTFSV-ENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQK 912
Query: 246 GFHEVASSPFFSP 284
GF E+ S P
Sbjct: 913 GFCELIPSHLLRP 925
>AF216521-1|AAF21125.1| 1061|Drosophila melanogaster E3 ubiquitin
ligase protein.
Length = 1061
Score = 36.7 bits (81), Expect = 0.066
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVR 245
+E TF+V E + G ++ ELKPGG + VTE NK+ Q L +
Sbjct: 854 IESTFSV-ENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQK 912
Query: 246 GFHEVASSPFFSP 284
GF E+ S P
Sbjct: 913 GFCELIPSHLLRP 925
>AE013599-2520|AAF57824.3| 1061|Drosophila melanogaster CG4943-PA
protein.
Length = 1061
Score = 36.7 bits (81), Expect = 0.066
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVR 245
+E TF+V E + G ++ ELKPGG + VTE NK+ Q L +
Sbjct: 854 IESTFSV-ENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQK 912
Query: 246 GFHEVASSPFFSP 284
GF E+ S P
Sbjct: 913 GFCELIPSHLLRP 925
>BT021390-1|AAX33538.1| 949|Drosophila melanogaster LD32282p
protein.
Length = 949
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVR 245
LE F+V + G+++ ELK G VTE NK+ QT+ +
Sbjct: 747 LELWFSVDFEVL-GQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLE 805
Query: 246 GFHEV 260
GF+EV
Sbjct: 806 GFNEV 810
>AY069406-1|AAL39551.1| 518|Drosophila melanogaster LD10565p
protein.
Length = 518
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVR 245
LE F+V + G+++ ELK G VTE NK+ QT+ +
Sbjct: 316 LELWFSVDFEVL-GQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLE 374
Query: 246 GFHEV 260
GF+EV
Sbjct: 375 GFNEV 379
>AF152865-1|AAD38975.1| 949|Drosophila melanogaster Suppressor of
deltex protein.
Length = 949
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVR 245
LE F+V + G+++ ELK G VTE NK+ QT+ +
Sbjct: 747 LELWFSVDFEVL-GQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLE 805
Query: 246 GFHEV 260
GF+EV
Sbjct: 806 GFNEV 810
>AE014134-334|AAN10440.1| 949|Drosophila melanogaster CG4244-PC,
isoform C protein.
Length = 949
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVR 245
LE F+V + G+++ ELK G VTE NK+ QT+ +
Sbjct: 747 LELWFSVDFEVL-GQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLE 805
Query: 246 GFHEV 260
GF+EV
Sbjct: 806 GFNEV 810
>AE014134-333|AAF51312.1| 949|Drosophila melanogaster CG4244-PB,
isoform B protein.
Length = 949
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVR 245
LE F+V + G+++ ELK G VTE NK+ QT+ +
Sbjct: 747 LELWFSVDFEVL-GQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLE 805
Query: 246 GFHEV 260
GF+EV
Sbjct: 806 GFNEV 810
>AE014134-332|AAF51311.1| 949|Drosophila melanogaster CG4244-PA,
isoform A protein.
Length = 949
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVR 245
LE F+V + G+++ ELK G VTE NK+ QT+ +
Sbjct: 747 LELWFSVDFEVL-GQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLE 805
Query: 246 GFHEV 260
GF+EV
Sbjct: 806 GFNEV 810
>AY061595-1|AAL29143.1| 834|Drosophila melanogaster SD04682p
protein.
Length = 834
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNK 170
LE TF + E + G+ + ELKPGG ++ VT NK
Sbjct: 630 LELTFCLDEDVF-GQKSQHELKPGGANIDVTNENK 663
>AY058619-1|AAL13848.1| 838|Drosophila melanogaster LD31220p
protein.
Length = 838
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNK 170
LE TF + E + G+ + ELKPGG ++ VT NK
Sbjct: 634 LELTFCLDEDVF-GQKSQHELKPGGANIDVTNENK 667
>AJ278468-1|CAC42101.1| 1007|Drosophila melanogaster putative
ubiquitin ligase protein.
Length = 1007
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNK 170
LE TF + E + G+ + ELKPGG ++ VT NK
Sbjct: 803 LELTFCLDEDVF-GQKSQHELKPGGANIDVTNENK 836
>AE014296-2927|AAS64973.1| 793|Drosophila melanogaster CG7555-PD,
isoform D protein.
Length = 793
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNK 170
LE TF + E + G+ + ELKPGG ++ VT NK
Sbjct: 589 LELTFCLDEDVF-GQKSQHELKPGGANIDVTNENK 622
>AE014296-2926|AAN11695.1| 956|Drosophila melanogaster CG7555-PB,
isoform B protein.
Length = 956
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNK 170
LE TF + E + G+ + ELKPGG ++ VT NK
Sbjct: 752 LELTFCLDEDVF-GQKSQHELKPGGANIDVTNENK 785
>AE014296-2925|AAN11694.1| 834|Drosophila melanogaster CG7555-PC,
isoform C protein.
Length = 834
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNK 170
LE TF + E + G+ + ELKPGG ++ VT NK
Sbjct: 630 LELTFCLDEDVF-GQKSQHELKPGGANIDVTNENK 663
>AE014296-2924|AAF49328.2| 1007|Drosophila melanogaster CG7555-PA,
isoform A protein.
Length = 1007
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 66 LEXTFAVSERLADGRVLEXELKPGGRDVAVTERNK 170
LE TF + E + G+ + ELKPGG ++ VT NK
Sbjct: 803 LELTFCLDEDVF-GQKSQHELKPGGANIDVTNENK 836
>AY069489-1|AAL39634.1| 973|Drosophila melanogaster LD21888p
protein.
Length = 973
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/76 (30%), Positives = 31/76 (40%)
Frame = +3
Query: 69 EXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVRG 248
E TF +S G V++ EL P G+DV V + NK+ Q +G
Sbjct: 775 EQTFKISYSDVFGDVVQHELVPNGQDVLVGQHNKELFVNLYSDFLLNTNIEQQFNAFRKG 834
Query: 249 FHEVASSPFFSPLPML 296
F V SPL +L
Sbjct: 835 FEMVTDE---SPLKLL 847
>AE014296-1931|AAF50078.1| 973|Drosophila melanogaster CG6190-PA
protein.
Length = 973
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/76 (30%), Positives = 31/76 (40%)
Frame = +3
Query: 69 EXTFAVSERLADGRVLEXELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVRG 248
E TF +S G V++ EL P G+DV V + NK+ Q +G
Sbjct: 775 EQTFKISYSDVFGDVVQHELVPNGQDVLVGQHNKELFVNLYSDFLLNTNIEQQFNAFRKG 834
Query: 249 FHEVASSPFFSPLPML 296
F V SPL +L
Sbjct: 835 FEMVTDE---SPLKLL 847
>AE013599-1473|AAF58519.3| 396|Drosophila melanogaster CG13158-PA
protein.
Length = 396
Score = 31.5 bits (68), Expect = 2.5
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = -2
Query: 700 VCKVHLDCCVREILAYILSWYYVVVAVPVKPDQYSSYIVFEIGAKKSDYDYSTL 539
V K +L C R +L Y+ +Y+V+V + ++P S I++ IG K+D+ Y +
Sbjct: 123 VNKYYLSCSTRNVL-YV--YYFVMVVMALEP-LVQSCIMYLIGFGKADFTYKRI 172
>AY094960-1|AAM11313.1| 964|Drosophila melanogaster SD03277p
protein.
Length = 964
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 123 ELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVRGFHEV 260
+LKP GRD AVTE NK Q + + GF+++
Sbjct: 778 DLKPNGRDTAVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDI 823
>AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB
protein.
Length = 5146
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 123 ELKPGGRDVAVTERNKKXXXXXXXXXXXXXXXXXQTEWLVRGFHEV 260
+LKP GRD AVTE NK Q + + GF+++
Sbjct: 4960 DLKPNGRDTAVTEENKFEYVQLVCQLKMSGSIRQQLDAFLEGFYDI 5005
>AY052069-1|AAK93493.1| 502|Drosophila melanogaster SD02279p
protein.
Length = 502
Score = 30.7 bits (66), Expect = 4.3
Identities = 26/90 (28%), Positives = 46/90 (51%)
Frame = -2
Query: 280 EKKGELATSWNPRTSHSVCSATPLSTLHRTTRSRYSFLFLSVTATSRPPGFNSXSNTLPS 101
E +AT+ + + S +V SA ++ + + S + TAT P +S SNTLPS
Sbjct: 50 ETPATIATNGSNQGSSNVLSAAKIAAVVAAAMAT-SNGNPTPTATI-PASSSSSSNTLPS 107
Query: 100 ANRSDTANVNSSDDNVKGAELGXLRIPYRS 11
+N S N +SS ++ ++ +++P S
Sbjct: 108 SNNSSCHNSSSSSNSCNSNQV-PIQVPILS 136
>AF125986-1|AAD22080.1| 704|Drosophila melanogaster putative
transcription factor protein.
Length = 704
Score = 30.7 bits (66), Expect = 4.3
Identities = 26/90 (28%), Positives = 46/90 (51%)
Frame = -2
Query: 280 EKKGELATSWNPRTSHSVCSATPLSTLHRTTRSRYSFLFLSVTATSRPPGFNSXSNTLPS 101
E +AT+ + + S +V SA ++ + + S + TAT P +S SNTLPS
Sbjct: 252 ETPATIATNGSNQGSSNVLSAAKIAAVVAAAMAT-SNGNPTPTATI-PASSSSSSNTLPS 309
Query: 100 ANRSDTANVNSSDDNVKGAELGXLRIPYRS 11
+N S N +SS ++ ++ +++P S
Sbjct: 310 SNNSSCHNSSSSSNSCNSNQV-PIQVPILS 338
>AE014298-1028|AAF46251.3| 704|Drosophila melanogaster CG9653-PA
protein.
Length = 704
Score = 30.7 bits (66), Expect = 4.3
Identities = 26/90 (28%), Positives = 46/90 (51%)
Frame = -2
Query: 280 EKKGELATSWNPRTSHSVCSATPLSTLHRTTRSRYSFLFLSVTATSRPPGFNSXSNTLPS 101
E +AT+ + + S +V SA ++ + + S + TAT P +S SNTLPS
Sbjct: 252 ETPATIATNGSNQGSSNVLSAAKIAAVVAAAMAT-SNGNPTPTATI-PASSSSSSNTLPS 309
Query: 100 ANRSDTANVNSSDDNVKGAELGXLRIPYRS 11
+N S N +SS ++ ++ +++P S
Sbjct: 310 SNNSSCHNSSSSSNSCNSNQV-PIQVPILS 338
>AB023583-1|BAA76710.1| 704|Drosophila melanogaster Brk protein.
Length = 704
Score = 30.7 bits (66), Expect = 4.3
Identities = 26/90 (28%), Positives = 46/90 (51%)
Frame = -2
Query: 280 EKKGELATSWNPRTSHSVCSATPLSTLHRTTRSRYSFLFLSVTATSRPPGFNSXSNTLPS 101
E +AT+ + + S +V SA ++ + + S + TAT P +S SNTLPS
Sbjct: 252 ETPATIATNGSNQGSSNVLSAAKIAAVVAAAMAT-SNGNPTPTATI-PASSSSSSNTLPS 309
Query: 100 ANRSDTANVNSSDDNVKGAELGXLRIPYRS 11
+N S N +SS ++ ++ +++P S
Sbjct: 310 SNNSSCHNSSSSSNSCNSNQV-PIQVPILS 338
>BT023500-1|AAY84900.1| 1203|Drosophila melanogaster LD29862p
protein.
Length = 1203
Score = 29.9 bits (64), Expect = 7.6
Identities = 26/82 (31%), Positives = 30/82 (36%)
Frame = -2
Query: 280 EKKGELATSWNPRTSHSVCSATPLSTLHRTTRSRYSFLFLSVTATSRPPGFNSXSNTLPS 101
EK+ L S + S C TP R R + F F + T T PP NS S
Sbjct: 23 EKRALLLRSIRSQNGCSKCYKTP-----RRVRRQSLFYFKTHTHTRAPPSVNSCPGEKMS 77
Query: 100 ANRSDTANVNSSDDNVKGAELG 35
D N DD A LG
Sbjct: 78 DINDDLLNYELGDDIDDQALLG 99
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,834,696
Number of Sequences: 53049
Number of extensions: 801514
Number of successful extensions: 2225
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2221
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6682378440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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