Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_A01
         (1258 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457016-1|CAG33297.1|   99|Homo sapiens CD14 protein.                 67   1e-10
BC003674-1|AAH03674.1|   99|Homo sapiens NADH dehydrogenase (ubi...    67   1e-10
AF047185-1|AAC04270.1|   99|Homo sapiens NADH-ubiquinone oxidore...    67   1e-10
AB054976-1|BAB21453.1|   99|Homo sapiens NADH dehydrogenase (ubi...    67   1e-10

>CR457016-1|CAG33297.1|   99|Homo sapiens CD14 protein.
          Length = 99

 Score = 66.9 bits (156), Expect = 1e-10
 Identities = 31/68 (45%), Positives = 41/68 (60%)
 Frame = +3

Query: 183 LKELRIXLCQXXKXXEGVREFXKNXXVNIKKENPNFXILIREXXGIQXXVWARYERGVEK 362
           L+E+RI LCQ     +GVR+F +   V +KK NP+  ILIRE   +Q  +WARY  G E 
Sbjct: 16  LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQET 75

Query: 363 STXLTNLS 386
           +  L N S
Sbjct: 76  NVPLNNFS 83


>BC003674-1|AAH03674.1|   99|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex, 2, 8kDa protein.
          Length = 99

 Score = 66.9 bits (156), Expect = 1e-10
 Identities = 31/68 (45%), Positives = 41/68 (60%)
 Frame = +3

Query: 183 LKELRIXLCQXXKXXEGVREFXKNXXVNIKKENPNFXILIREXXGIQXXVWARYERGVEK 362
           L+E+RI LCQ     +GVR+F +   V +KK NP+  ILIRE   +Q  +WARY  G E 
Sbjct: 16  LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQET 75

Query: 363 STXLTNLS 386
           +  L N S
Sbjct: 76  NVPLNNFS 83


>AF047185-1|AAC04270.1|   99|Homo sapiens NADH-ubiquinone
           oxidoreductase subunit CI-B8 protein.
          Length = 99

 Score = 66.9 bits (156), Expect = 1e-10
 Identities = 31/68 (45%), Positives = 41/68 (60%)
 Frame = +3

Query: 183 LKELRIXLCQXXKXXEGVREFXKNXXVNIKKENPNFXILIREXXGIQXXVWARYERGVEK 362
           L+E+RI LCQ     +GVR+F +   V +KK NP+  ILIRE   +Q  +WARY  G E 
Sbjct: 16  LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQET 75

Query: 363 STXLTNLS 386
           +  L N S
Sbjct: 76  NVPLNNFS 83


>AB054976-1|BAB21453.1|   99|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex 2 protein.
          Length = 99

 Score = 66.9 bits (156), Expect = 1e-10
 Identities = 31/68 (45%), Positives = 41/68 (60%)
 Frame = +3

Query: 183 LKELRIXLCQXXKXXEGVREFXKNXXVNIKKENPNFXILIREXXGIQXXVWARYERGVEK 362
           L+E+RI LCQ     +GVR+F +   V +KK NP+  ILIRE   +Q  +WARY  G E 
Sbjct: 16  LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQET 75

Query: 363 STXLTNLS 386
           +  L N S
Sbjct: 76  NVPLNNFS 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,063,653
Number of Sequences: 237096
Number of extensions: 408868
Number of successful extensions: 448
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17945070980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)