Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_A01
         (1258 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032652-10|CAA21708.2|   92|Caenorhabditis elegans Hypothetical...    77   3e-14
Z81038-9|CAB02765.1|  189|Caenorhabditis elegans Hypothetical pr...    32   0.98 

>AL032652-10|CAA21708.2|   92|Caenorhabditis elegans Hypothetical
           protein Y63D3A.7 protein.
          Length = 92

 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
 Frame = +3

Query: 159 MXIRXGG-ALKELRIXLCQXXKXXEGVREFXKNXXVNIKKENPNFXILIREXXGIQXXVW 335
           M +R  G AL+E+RI +CQ      GVR F +N  V IKK NP F ILIRE  GI   V+
Sbjct: 1   MSVRLAGTALREIRIHVCQKSPASAGVRAFIENDYVGIKKANPQFPILIREASGIVPRVF 60

Query: 336 ARYERGVEKSTXLTNLSFYXVLSXI 410
           ARYE GVE+   L +LS   V S I
Sbjct: 61  ARYEHGVERVATLEDLSRENVKSTI 85


>Z81038-9|CAB02765.1|  189|Caenorhabditis elegans Hypothetical
           protein C25A1.13 protein.
          Length = 189

 Score = 31.9 bits (69), Expect = 0.98
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +3

Query: 168 RXGGALKELRIXLCQXXKXXEGVREFXKNXXVNIKKENPNFXILIREXXGIQXXVWARYE 347
           R    L  + +  C+  +   GVR F +N  V I ++NP+  I  +        + A Y 
Sbjct: 40  RYTNQLHRITVRFCKQSESSVGVRNFIENQLVEIGRKNPSVVIYAQPVRNSNPSIRAEYG 99

Query: 348 RG 353
            G
Sbjct: 100 NG 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,476,196
Number of Sequences: 27780
Number of extensions: 73606
Number of successful extensions: 65
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3495543430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)