Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_P23
         (887 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54PU7 Cluster: Putative uncharacterized protein; n=1; ...    36   1.8  
UniRef50_A7RUI7 Cluster: Predicted protein; n=1; Nematostella ve...    33   7.4  

>UniRef50_Q54PU7 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 995

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
 Frame = +3

Query: 474 LQIQQPTDRLIIKTIDVYSSLK*IRSKFNQILRSS---FNLLEN*ENVQIKNIML 629
           L +++  + LIIK +++  +LK I +KFN + + S   FN + N EN + K ++L
Sbjct: 636 LLVEKEKEELIIKNLEIEKNLKSITNKFNNLSQKSEEYFNQIINMENEKQKQLLL 690


>UniRef50_A7RUI7 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 559

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 254 LCIRCFDARLVTLGWV-LAWLICDFKFDETIEGG 352
           L IRC++  L TL  + L W +C+F F E++ GG
Sbjct: 70  LFIRCWNNELFTLTMIELVWHLCEFLFIESVPGG 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,833,843
Number of Sequences: 1657284
Number of extensions: 13991718
Number of successful extensions: 31950
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31913
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)