Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_P23
         (887 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    25   0.79 
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    24   1.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.6  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   7.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   7.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.8  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -1

Query: 320 HKSTKPTPNQESPIEHQNI*CKVQWNVRTK-YSRTFAS 210
           HKS +  P     I+HQ +   V+   RT+  +  FAS
Sbjct: 81  HKSRRKAPQSFEDIQHQRVMANVRERQRTQSLNEAFAS 118


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 56  IIKVFLFRSQIELEMRRKLRPGQSM*LKNLQIG 154
           + +VF+FR  I L+++ +L+      L  LQ+G
Sbjct: 104 LYQVFVFRRSIYLQIKERLKTQGISHLDKLQLG 136


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 367 YMSPPTSFYCLIKLKITNQPSQHPTKS 287
           +  PP S+  LI + I N P +  T S
Sbjct: 138 HAKPPYSYISLITMAIQNSPQKMLTLS 164


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 358 PPTSFYCLIKLKITNQPSQHPT 293
           PP S+  LI + I N P +  T
Sbjct: 84  PPYSYNALIMMAIRNSPEKRLT 105


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 800 CMHKVDLPL 774
           C HKVD+PL
Sbjct: 568 CTHKVDIPL 576


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 79  IPNRTRDETKTSSRTKYVIKKST 147
           +P  T   T+T+  TK+  K ST
Sbjct: 161 LPPTTSTTTRTTLTTKFTTKPST 183


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 176  FGRNMKLIISYKKQKF 223
            F   +K +++YKK+KF
Sbjct: 1193 FDIQLKQVVNYKKKKF 1208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,790
Number of Sequences: 336
Number of extensions: 4131
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)