Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_P22
(888 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 48 2e-06
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 46 5e-06
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 45 1e-05
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 45 2e-05
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 42 2e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 42 2e-04
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 41 3e-04
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 37 0.004
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 36 0.008
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 34 0.024
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 33 0.072
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 31 0.22
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 31 0.29
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 30 0.38
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 30 0.38
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 29 1.2
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 29 1.2
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 28 1.5
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 28 1.5
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 27 2.7
SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schi... 27 4.7
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 48.0 bits (109), Expect = 2e-06
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = +2
Query: 431 RYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTK 610
+Y G VDC K KQE + ALY G + R + FG ++N+L + G
Sbjct: 140 KYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIRNSLTPASSRIG-- 197
Query: 611 EHLPTNTFCAAFAGGLSSAIANPTDVLKVRMQ 706
+ N G + ++ P DV+K R+Q
Sbjct: 198 -EIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQ 228
Score = 47.6 bits (108), Expect = 2e-06
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Frame = +2
Query: 434 YTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAK--RRADGGT 607
Y G DC+ K K EG LY GI P +L +A +KF + T K +R D
Sbjct: 45 YNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSP 104
Query: 608 KEHLPTNTFCAAFAGGLSSAIANPTDVLKVRMQ--MGEEKRN-LVRCFLDIYRTE 763
+ T + CA F + + P +++K+R+Q K N V CF I + E
Sbjct: 105 ALSILTGS-CAGFT---ETFVVVPFELMKIRLQDVKNASKYNGTVDCFTKIVKQE 155
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 431 RYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTI 544
+Y ++ +++EG ALY G P VLR G I
Sbjct: 239 KYNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGI 276
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +2
Query: 629 TFCAAFAGGLSSAIA-NPTDVLKVRMQMGEEK---RNLVRCFLDIYRTEG 766
TF A G+S + P DV+K RMQ+ K C I + EG
Sbjct: 11 TFAAGAVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEG 60
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 46.4 bits (105), Expect = 5e-06
Identities = 25/92 (27%), Positives = 40/92 (43%)
Frame = +2
Query: 434 YTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTKE 613
YT + ++K +EG+ + G LR YG ++F T+ LK K R+ +
Sbjct: 56 YTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRALKNRSHQNLEN 115
Query: 614 HLPTNTFCAAFAGGLSSAIANPTDVLKVRMQM 709
H A AG S A P D+ + R+ +
Sbjct: 116 H--ERLLFGAIAGAASCATTYPLDIARTRLSI 145
Score = 34.7 bits (76), Expect = 0.018
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Frame = +2
Query: 479 GVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTKEHLPTNTFCAAFAGGL 658
G ALY G+ +L Y +I F T+ K AD + L F F G +
Sbjct: 185 GYPALYNGLPATLLNVVPYVSICFFTFEFCKQKFFSN-ADLTAFQKL----FLGGFTGII 239
Query: 659 SSAIANPTDVLKVRMQ------MGEEKRNLVRCFLDIYRTEG 766
+ P DVL+ R Q +G +N+ IY+TEG
Sbjct: 240 GQTLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEG 281
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 300 NWRPFIYGGLASIVAEFGTFPIDTTKTRLQIQ--GTEDRSSXMLN 428
N ++G +A + T+P+D +TRL I+ G RS + N
Sbjct: 115 NHERLLFGAIAGAASCATTYPLDIARTRLSIETAGLTSRSLAINN 159
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 45.2 bits (102), Expect = 1e-05
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Frame = +2
Query: 443 MVDCII-KTSK-QEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTKEH 616
M CII K K EG +AL+ G+ P ++ +I F +Y K LA +G +E+
Sbjct: 104 MDTCIILKNVKVHEGTRALFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNG--QEN 161
Query: 617 LPTNTFCAAFAGGLSSAIANPTDVLKVRMQMGEEK------RNLVRCFLDIYRTEG 766
+ AA AG ++SA NP ++K R+Q+ ++ R+ + C + R EG
Sbjct: 162 SQIHLMAAAIAGVITSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEG 217
Score = 40.3 bits (90), Expect = 4e-04
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Frame = +2
Query: 431 RYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALA---KRRADG 601
+Y +DCIIKT + EG + LY G+ A L T+++ Y K+A+A RR +
Sbjct: 201 QYRSSIDCIIKTIRLEGFRGLYKGL-SASLLGVGESTLQWVLYEKFKHAVAIRQLRRKEL 259
Query: 602 GTKEHLPTNTF-------CAAFAGGLSSAIANPTDVLKVRMQM-----GEEK-RNLVRCF 742
G +E + A A +++ IA P +V++ R++ G K L++CF
Sbjct: 260 GIQETIYDKVLDWGGKLGGAGIAKFMAAGIAYPHEVVRTRLRQSPSINGTPKYTGLIQCF 319
Query: 743 LDIYRTEG 766
++ +G
Sbjct: 320 KLVWMEQG 327
Score = 33.5 bits (73), Expect = 0.041
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 312 FIYGGLASIVAEFGTFPIDTTKTRLQIQGTEDR 410
FI GG+A ++ T P+D KTRLQ +DR
Sbjct: 52 FIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDR 84
Score = 33.5 bits (73), Expect = 0.041
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 431 RYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTY 559
+YTG++ C ++G+ LY G+ +LR I FG+Y
Sbjct: 311 KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSY 353
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 44.8 bits (101), Expect = 2e-05
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 425 ELRYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGG 604
E ++ G+VD KT + +G++ LY G P+V+ Y + FG Y TLK + +G
Sbjct: 172 ERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLEGN 231
Query: 605 TKEHLPTNTFCAAFAGGLSSAIAN-PTDVLKVRMQM 709
+F +A S +A+ P D ++ RM M
Sbjct: 232 F-----LASFLLGWAVTTGSGVASYPLDTIRRRMMM 262
Score = 33.5 bits (73), Expect = 0.041
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 9/121 (7%)
Frame = +2
Query: 431 RYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTK 610
RY G+ +C +T+ +EGV +L+ G VLR + F K ++ G
Sbjct: 70 RYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYA 129
Query: 611 EHLPTNTFCAAFAGGLSSAIANPTDVLKVRM--------QMGEEKRN-LVRCFLDIYRTE 763
+ N AG S D + R+ + GE + N LV + YR++
Sbjct: 130 KWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSD 189
Query: 764 G 766
G
Sbjct: 190 G 190
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 41.5 bits (93), Expect = 2e-04
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 443 MVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTKEHLP 622
+V+ +IK S EGV +L+ GI ++ I F K+ + + +
Sbjct: 61 IVNSVIKISSTEGVYSLWRGISSVIMGAGPSHAIYFSVLEFFKSKI------NASPDRPL 114
Query: 623 TNTFCAAFAGGLSSAIANPTDVLKVRMQMGEEK-RNLVRCFLDIYRTEG 766
+ A A +S A P DV+K RMQ+ K ++ + C ++R EG
Sbjct: 115 ASALAGACAITISDAFMTPFDVIKQRMQLPSRKYKSALHCATTVFRNEG 163
Score = 30.7 bits (66), Expect = 0.29
Identities = 19/92 (20%), Positives = 36/92 (39%)
Frame = +2
Query: 431 RYTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTK 610
+Y + C + EG+ A Y + + I+ TY T + L T
Sbjct: 147 KYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYDTCMSFLNPNAVYDPT- 205
Query: 611 EHLPTNTFCAAFAGGLSSAIANPTDVLKVRMQ 706
++ +G ++S++ P DV+K +Q
Sbjct: 206 ----SHIISGGLSGAIASSLTTPLDVVKTLLQ 233
Score = 29.1 bits (62), Expect = 0.88
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = +2
Query: 641 AFAGGLSSAIANPTDVLKVRMQM--GEEKR---NLVRCFLDIYRTEG 766
AF+G L ++ P D +K RMQM G + N+V + I TEG
Sbjct: 27 AFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKISSTEG 73
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 315 IYGGLASIVAEFGTFPIDTTKTRLQIQGT 401
I GGL+ +A T P+D KT LQ +G+
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRGS 237
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 41.5 bits (93), Expect = 2e-04
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 473 QEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTKEHLPTNTFCA-AFA 649
+ G+++ + G VL+ +IKFGTY +K L ++ H P ++ A A
Sbjct: 182 RNGIRSFFVGNGINVLKVMPESSIKFGTYEAMKRVLG---ISSSSENHSPLYSYLAGGMA 238
Query: 650 GGLSSAIANPTDVLKVRMQMGEEKR 724
G ++ P D LK R+Q + R
Sbjct: 239 GSVAQMFIYPVDTLKFRIQCSDLSR 263
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 434 YTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNAL 580
Y G +DC KT+K EG + LY G+ P +L+ A I + Y K L
Sbjct: 375 YDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKKWL 423
Score = 29.5 bits (63), Expect = 0.67
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 312 FIYGGLASIVAEFGTFPIDTTKTRLQ 389
++ GG+A VA+ +P+DT K R+Q
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQ 257
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 318 YGGLASIVAEFGTFPIDTTKTRLQIQGT 401
+G L+ FP++ +TRLQ QGT
Sbjct: 341 FGALSGSTGATIVFPLNVIRTRLQTQGT 368
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 312 FIYGGLASIVAEFGTFPIDTTKTRLQIQGTEDRSSXMLNYGIL 440
FI GG+A IV+ T P+D K L I T + S + L
Sbjct: 131 FISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATL 172
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 40.7 bits (91), Expect = 3e-04
Identities = 27/99 (27%), Positives = 46/99 (46%)
Frame = +2
Query: 434 YTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTKE 613
Y +DC+ K SK EG+ A Y G +L +I+F T+ K ++ GT
Sbjct: 55 YNNALDCVKKISKNEGLAAFYKGTVLPLLGIGFCVSIQFTTFEYCKRFFSR----DGTPV 110
Query: 614 HLPTNTFCAAFAGGLSSAIANPTDVLKVRMQMGEEKRNL 730
+P A +G +S + P + +++R+Q+ K L
Sbjct: 111 TMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQTGKNVL 149
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 36.7 bits (81), Expect = 0.004
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 294 ERNWRPFIYGGLASIVAEFGTFPIDTTKTRLQ 389
E W+P + GGL+ +VAE FP+ T TR+Q
Sbjct: 5 EVQWKPILVGGLSGLVAETLVFPLSTIITRVQ 36
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 35.9 bits (79), Expect = 0.008
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +2
Query: 434 YTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKR--RADGGT 607
Y + + +KQEG+K + G +LR + + Y L+ K + D G
Sbjct: 155 YPSFRGAVKQIAKQEGMKTFFYGYRATILRDIPFSGFQLLFYEKLRQVAQKECGQKDIGV 214
Query: 608 KEHLPTNTFCAAFAGGLSSAIANPTDVLKVRMQ 706
L T + A AG L++ P DV K R+Q
Sbjct: 215 FRELITGSLAGAGAGFLTT----PLDVAKTRLQ 243
Score = 32.7 bits (71), Expect = 0.072
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 303 WRPFIYGGLASIVAEFGTFPIDTTKTRLQIQ-GTEDRSSXMLNYG 434
+R I G LA A F T P+D KTRLQ T D+ S +N G
Sbjct: 215 FRELITGSLAGAGAGFLTTPLDVAKTRLQTMIRTTDKVSDDINSG 259
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 34.3 bits (75), Expect = 0.024
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +2
Query: 434 YTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTKE 613
Y G + +EG++ LY G P ++ + G K+G Y K+ + G K
Sbjct: 58 YPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYS--TLVGAQKA 115
Query: 614 H-LPTNTFCAAFAGG--LSSAIANPTDVLKVRMQ 706
H T+ + AA A L+ + P + +KVR+Q
Sbjct: 116 HEYRTSIYLAASASAELLADIMLCPMEAIKVRVQ 149
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 32.7 bits (71), Expect = 0.072
Identities = 26/102 (25%), Positives = 46/102 (45%)
Frame = +2
Query: 461 KTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTKEHLPTNTFCA 640
+T ++EGV+AL+ G A L YG +F + LK+ L + A +H N C
Sbjct: 57 ETVQKEGVRALWRGNVVAELLYLVYGAAEFVAFSKLKH-LTENLA---MNDH-AVNFLCG 111
Query: 641 AFAGGLSSAIANPTDVLKVRMQMGEEKRNLVRCFLDIYRTEG 766
AG ++ + P D ++ + + +++ IY G
Sbjct: 112 TSAGIFATLTSYPLDTMRTKFASYAKTPHMLPATKKIYAEAG 153
Score = 30.3 bits (65), Expect = 0.38
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 623 TNTFCAAFAGGLSSAIANPTD-VLKVRMQMGEEKRNLVRCFLDIYRTEG 766
++T AG S AI P D V+K ++ CFL IYR G
Sbjct: 194 SSTLSGVIAGAGSKAIMFPVDTVVKTLQTFPSNYKSFKDCFLSIYRNSG 242
Score = 29.5 bits (63), Expect = 0.67
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 303 WRPFIYGGLASIVAEFGTFPIDTTKTRLQI 392
W + GG++S++ F P D K R+QI
Sbjct: 17 WHYTLAGGISSVICRFMIAPFDVIKIRMQI 46
Score = 26.2 bits (55), Expect = 6.2
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +2
Query: 647 AGGLSSAIAN----PTDVLKVRMQMGEEKRNLVRCFLDIYRTEG 766
AGG+SS I P DV+K+RMQ+ + +L F + + EG
Sbjct: 22 AGGISSVICRFMIAPFDVIKIRMQITQS--SLRPVFKETVQKEG 63
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 434 YTGMVDCIIKTSKQEGVKALYCGIWPAVLRQA 529
Y DC + + G+K LY G+ ++L+ A
Sbjct: 227 YKSFKDCFLSIYRNSGIKGLYRGLSVSMLKVA 258
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 31.1 bits (67), Expect = 0.22
Identities = 19/89 (21%), Positives = 40/89 (44%)
Frame = +2
Query: 443 MVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTKEHLP 622
+++ I ++ EG+K Y G W V T+ + Y +++++ P
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT-TVSWWVCYEESKKYLQKQSNWDISVIAP 177
Query: 623 TNTFCAAFAGGLSSAIANPTDVLKVRMQM 709
C+A +++ I+ P D++K R Q+
Sbjct: 178 ---ICSALGTVVATTISTPLDIVKTRYQV 203
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 30.7 bits (66), Expect = 0.29
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Frame = +2
Query: 434 YTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAK-RRADGGTK 610
Y + + + K+ GVK L+ G A+LR + +++ Y K + + G
Sbjct: 171 YKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMIEHYNLLEEGMI 230
Query: 611 EHLPTNTFCAAFAGGLSSAIANPTDVLKVRMQMGEEKRNLVRCFLDIYRTEG 766
+HL T + + F + I + + E +N + C L R+EG
Sbjct: 231 KHL-TASAVSGFGVCCTMQIFDTVMTRMYNQKNKELYKNPIDCILKTIRSEG 281
Score = 30.7 bits (66), Expect = 0.29
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 434 YTGMVDCIIKTSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNAL 580
Y +DCI+KT + EG ALY G + R A + TI T+ N L
Sbjct: 266 YKNPIDCILKTIRSEGFFALYKGFGAHLARIAPH-TIFCLTFVEQTNKL 313
Score = 29.1 bits (62), Expect = 0.88
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 312 FIYGGLASIVAEFGTFPIDTTKTRLQIQG 398
F+ GGLA+ A T P + KTR Q+QG
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQG 55
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 321 GGLASIVAEFGTFPIDTTKTRLQIQG 398
G A + + FPIDT KTRLQ +G
Sbjct: 89 GICAGLAVDLSLFPIDTLKTRLQAKG 114
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 476 EGVKALYCGIWPAVLRQATYGTIKFGTYYTLKN 574
EG ALY GI P VL + G I G Y + N
Sbjct: 306 EGFLALYKGIVPRVLWLSGGGAIFLGCYDVILN 338
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 312 FIYGGLASIVAEFGTFPIDTTKTRLQ 389
F+ G +A I+ + T PIDT K+R+Q
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ 232
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 306 RPFIYGGLASIVAEFGTFPIDTTKTRLQI-QGTEDRSSXMLNYGILGWWTASS 461
+ I GG+A + T+P + KTRLQ+ + E + + +G L W+ S
Sbjct: 19 KSIIAGGVAGAIEISITYPAEFAKTRLQLYRNVEGTKAKLPPFG-LEWYRGCS 70
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 312 FIYGGLASIVAEFGTFPIDTTKTRLQIQG-TEDRSSXML 425
F+ GG++ +A T P D +KT Q+ G T R ML
Sbjct: 250 FVSGGISGTLATLLTQPFDVSKTAKQVHGHTLTRGQFML 288
Score = 26.2 bits (55), Expect = 6.2
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 327 LASIVAEFGTFPIDTTKTRLQIQGTEDRSS--XMLNYGILGWWTASSKLPSKRVSRLYIV 500
+ S++ P+D KTRLQ + SS + + ILG + K VS LY +
Sbjct: 33 VGSVITTLTVTPLDVVKTRLQSESISQYSSTQPISSAKILGKGRPAPKPLGGPVSGLYQI 92
Query: 501 A 503
A
Sbjct: 93 A 93
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 28.7 bits (61), Expect = 1.2
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +2
Query: 470 KQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTKEHLPTNTFCAAFA 649
K EG++ Y G P++L + G ++F Y LK L K+R + +++ F +A +
Sbjct: 145 KNEGLRGCYAGFAPSLL-GVSQGALQFMAYEKLK--LWKQRRP-TSLDYI----FMSAAS 196
Query: 650 GGLSSAIANPTDVLKVRMQ-MGEEKRNLVRCFLDIYRTEG 766
++ P V++ R+Q M R+++ L +R +G
Sbjct: 197 KVFAAVNMYPLLVIRTRLQVMRSPHRSIMNLVLQTWRLQG 236
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 620 PTNTFCAAF-AGGLSSAIANPTDVLKVRMQMGEEKRNLVRCFLDIYRTEG 766
P +TF AA + +S+ I P D +KVR Q + CF + + EG
Sbjct: 17 PASTFSAALVSSAISNVIGYPLDSIKVRQQT-YNFPTIRSCFQNAVKNEG 65
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/71 (23%), Positives = 24/71 (33%)
Frame = +2
Query: 494 YCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTKEHLPTNTFCAAFAGGLSSAIA 673
+ +W T + Y+T+ K K H F AF G LS +
Sbjct: 174 FTALWNGYRYHLTRDALGSACYFTIYETFKKNLIANDVKPHF-AYAFSGAFCGALSWILV 232
Query: 674 NPTDVLKVRMQ 706
P D K +Q
Sbjct: 233 FPVDTAKSIVQ 243
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 635 CAAFAGGLSSAIANPTDVLKVRMQMGEEKRN 727
C AFAG ++ P +V + +MQ+G ++N
Sbjct: 242 CGAFAGVCGQTVSYPFEVCRRKMQIGGIRKN 272
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 464 TSKQEGVKALYCGIWPAVLRQATYGTIKFGTYYTLKNALAKRRADG 601
TS QE V+ + PA+ + T YY+ KN ADG
Sbjct: 52 TSLQEPVRIYGDSVSPAISSSKAHSTSSVSPYYSEKNESQALNADG 97
>SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 970
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -3
Query: 688 YVGRVGNSTGQSTRKGSTESVRREVLLRSTVRSSLGERVLQRIVGTKLNRAI 533
YVG V N+T ++ GS ++V + R + R R+VG ++ AI
Sbjct: 374 YVGHVDNATIAQSKGGSQQTVLLTPMDRRVPKIRFRTRQAPRLVGRRIVVAI 425
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,277,341
Number of Sequences: 5004
Number of extensions: 66372
Number of successful extensions: 210
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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