BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_P21
(883 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000512FED Cluster: PREDICTED: hypothetical protein ... 105 2e-21
UniRef50_UPI00015B4186 Cluster: PREDICTED: similar to Family wit... 98 2e-19
UniRef50_Q8TB05 Cluster: Protein FAM100A; n=37; Eumetazoa|Rep: P... 96 9e-19
UniRef50_UPI00005848C4 Cluster: PREDICTED: hypothetical protein;... 92 2e-17
UniRef50_UPI0000ECAABD Cluster: Protein FAM100A.; n=3; Gallus ga... 64 3e-09
UniRef50_Q4S4E7 Cluster: Chromosome 2 SCAF14738, whole genome sh... 55 3e-06
UniRef50_Q8TB05-2 Cluster: Isoform 2 of Q8TB05 ; n=5; Eutheria|R... 54 6e-06
UniRef50_UPI00005A1A6F Cluster: PREDICTED: hypothetical protein ... 51 3e-05
UniRef50_UPI0000ECAABC Cluster: UPI0000ECAABC related cluster; n... 40 0.11
UniRef50_A5ISX2 Cluster: Dynamin family protein; n=16; Staphyloc... 33 7.3
UniRef50_A3DCG3 Cluster: Type 3a, cellulose-binding; n=1; Clostr... 33 7.3
UniRef50_A0QXU9 Cluster: Choline dehydrogenase; n=1; Mycobacteri... 33 9.6
>UniRef50_UPI0000512FED Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Apis mellifera|Rep: PREDICTED:
hypothetical protein isoform 1 - Apis mellifera
Length = 141
Score = 105 bits (251), Expect = 2e-21
Identities = 53/86 (61%), Positives = 58/86 (67%)
Frame = +1
Query: 61 TLREQVMINQFVLAAGCXXXXXXXXXXXXHWQFETALSIFFQDMXXXXXXXXXXXXHYGQ 240
TLREQVMINQFVLAAGC HWQFETALSIFFQ+ H+GQ
Sbjct: 3 TLREQVMINQFVLAAGCAREQAKQLLQAAHWQFETALSIFFQE-AAIPPCAQGPGTHFGQ 61
Query: 241 QLMTPCNTPATPPNFPDALAAFSRLS 318
+TPCNTPATPPNFPDAL AFS++S
Sbjct: 62 --ITPCNTPATPPNFPDALLAFSKMS 85
>UniRef50_UPI00015B4186 Cluster: PREDICTED: similar to Family with
sequence similarity 100, member B; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to Family with
sequence similarity 100, member B - Nasonia vitripennis
Length = 143
Score = 98.3 bits (234), Expect = 2e-19
Identities = 52/89 (58%), Positives = 59/89 (66%)
Frame = +1
Query: 52 MDSTLREQVMINQFVLAAGCXXXXXXXXXXXXHWQFETALSIFFQDMXXXXXXXXXXXXH 231
MD+ LREQVMINQF+LAAGC HWQFETALSIFFQ+ H
Sbjct: 1 MDA-LREQVMINQFMLAAGCAREQAKQLLQAAHWQFETALSIFFQE-------AAIPSAH 52
Query: 232 YGQQLMTPCNTPATPPNFPDALAAFSRLS 318
+L+TPCNTPATPPNFPDAL AFS++S
Sbjct: 53 PHFRLITPCNTPATPPNFPDALLAFSKMS 81
>UniRef50_Q8TB05 Cluster: Protein FAM100A; n=37; Eumetazoa|Rep:
Protein FAM100A - Homo sapiens (Human)
Length = 177
Score = 96.3 bits (229), Expect = 9e-19
Identities = 53/112 (47%), Positives = 61/112 (54%)
Frame = +1
Query: 46 LKMDSTLREQVMINQFVLAAGCXXXXXXXXXXXXHWQFETALSIFFQDMXXXXXXXXXXX 225
+ MD L+ QVMINQFVL AGC HWQFETALS FFQ+
Sbjct: 3 VNMDE-LKHQVMINQFVLTAGCAADQAKQLLQAAHWQFETALSAFFQETNIPYSH----- 56
Query: 226 XHYGQQLMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVCMNTAPPVSP 381
H+ Q + TP NTPATPPNFPDAL FSRL + S ++ G A SP
Sbjct: 57 -HHHQMMCTPANTPATPPNFPDALTMFSRLKASESFHSGGSGSPMAATATSP 107
>UniRef50_UPI00005848C4 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 133
Score = 91.9 bits (218), Expect = 2e-17
Identities = 49/113 (43%), Positives = 61/113 (53%)
Frame = +1
Query: 52 MDSTLREQVMINQFVLAAGCXXXXXXXXXXXXHWQFETALSIFFQDMXXXXXXXXXXXXH 231
M++ L+EQ+MI+QFV AAGC HWQFETALS+FFQ+
Sbjct: 1 MEALLKEQIMISQFVSAAGCNPDQARQILQKTHWQFETALSVFFQE-AAIPANNHQYYRQ 59
Query: 232 YGQQLMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVCMNTAPPVSPLAT 390
G + P NTPATPPNFPD L +FSR+ T + G M A SP+ T
Sbjct: 60 GGHSIHAPANTPATPPNFPDILTSFSRMGATPTDKCLGASPM--AMATSPIQT 110
>UniRef50_UPI0000ECAABD Cluster: Protein FAM100A.; n=3; Gallus
gallus|Rep: Protein FAM100A. - Gallus gallus
Length = 127
Score = 64.5 bits (150), Expect = 3e-09
Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +1
Query: 160 ETALSIFFQDMXXXXXXXXXXXXHYGQQLMTPCNTPATPPNFPDALAAFSRLSTTGSPNN 339
+TALS FFQ+ H+ Q + TP NTPATPPNFPDAL FSRL + S N+
Sbjct: 1 QTALSAFFQETNIPYS-------HHHQMMCTPANTPATPPNFPDALTMFSRLKASESFNS 53
Query: 340 AGGVC-MNTA--PPVSPLATH 393
+ V M T+ PP PL H
Sbjct: 54 SSPVASMATSPPPPAPPLPQH 74
>UniRef50_Q4S4E7 Cluster: Chromosome 2 SCAF14738, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF14738, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 200
Score = 54.8 bits (126), Expect = 3e-06
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = +1
Query: 64 LREQVMINQFVLAAGCXXXXXXXXXXXXHWQFETALSIFFQD 189
L+ QVMINQFVL AGC HWQFETALS FFQ+
Sbjct: 4 LKHQVMINQFVLTAGCAADQAKQLLQAAHWQFETALSAFFQE 45
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1
Query: 244 LMTPCNTPATPPNFPDALAAFSRLSTTGS 330
+ P NTPATPPNFPDAL FSRL + S
Sbjct: 92 MCAPANTPATPPNFPDALTMFSRLKASES 120
>UniRef50_Q8TB05-2 Cluster: Isoform 2 of Q8TB05 ; n=5; Eutheria|Rep:
Isoform 2 of Q8TB05 - Homo sapiens (Human)
Length = 212
Score = 53.6 bits (123), Expect = 6e-06
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +1
Query: 232 YGQQLMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVCMNTAPPVSP 381
+ Q+ TP NTPATPPNFPDAL FSRL + S ++ G A SP
Sbjct: 93 FPSQMCTPANTPATPPNFPDALTMFSRLKASESFHSGGSGSPMAATATSP 142
>UniRef50_UPI00005A1A6F Cluster: PREDICTED: hypothetical protein
XP_846654; n=2; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_846654 - Canis familiaris
Length = 207
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +1
Query: 238 QQLMTPCNTPATPPNFPDALAAFSRLSTTG--SPNNAGGVCMNTAPPVS 378
QQ+ TP NTPATPPNFPDALA FS+L + +N+ + +PP +
Sbjct: 101 QQMCTPSNTPATPPNFPDALAMFSKLRASDGLQSSNSPMTAVACSPPAN 149
>UniRef50_UPI0000ECAABC Cluster: UPI0000ECAABC related cluster; n=1;
Gallus gallus|Rep: UPI0000ECAABC UniRef100 entry -
Gallus gallus
Length = 129
Score = 39.5 bits (88), Expect = 0.11
Identities = 26/54 (48%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -3
Query: 392 CVASGDTGGAVFIQ---TPPALLGLPVVDSRENAANASGKFGGVAGVLHGVINC 240
C SG GG + T LL L REN ASGK GGVAGVL GV C
Sbjct: 50 CWGSGGAGGGGDVAMEATGLLLLKLSEALRRENMVRASGKLGGVAGVLAGVHIC 103
>UniRef50_A5ISX2 Cluster: Dynamin family protein; n=16;
Staphylococcus|Rep: Dynamin family protein -
Staphylococcus aureus subsp. aureus JH9
Length = 1146
Score = 33.5 bits (73), Expect = 7.3
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 664 STLN-NVXQVIAAVGSH*LMYVQFIHNSTAHIVHHXKNKLWMLLN*YATFILAYVHCTL 491
S LN N I AV H +YV + N H ++ + K W + YATF+ VH L
Sbjct: 676 SHLNKNQLAFIQAVEKHYKLYVNMLENGEKHAINQQELKKWSAEDEYATFVKT-VHIAL 733
>UniRef50_A3DCG3 Cluster: Type 3a, cellulose-binding; n=1;
Clostridium thermocellum ATCC 27405|Rep: Type 3a,
cellulose-binding - Clostridium thermocellum (strain
ATCC 27405 / DSM 1237)
Length = 522
Score = 33.5 bits (73), Expect = 7.3
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +1
Query: 238 QQLMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVCMNTAPPVSP 381
Q +MTP NTPA P P A +++ +P A V +NT PV P
Sbjct: 284 QVVMTPANTPAKPTAAPTKAPAAVAVTSAKTPERATTVPVNT--PVKP 329
>UniRef50_A0QXU9 Cluster: Choline dehydrogenase; n=1; Mycobacterium
smegmatis str. MC2 155|Rep: Choline dehydrogenase -
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Length = 489
Score = 33.1 bits (72), Expect = 9.6
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +1
Query: 253 PCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVCMNTAPPVSPLATHXXXXSHQSHV 423
P TP T FP +A+ T P + G V + + P P+ H +H V
Sbjct: 364 PFGTPETAERFPLPASAWFLYGTVARPQSRGTVTLTGSHPCDPVQVHANSLAHPEDV 420
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,904,916
Number of Sequences: 1657284
Number of extensions: 13588623
Number of successful extensions: 30685
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 29370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30642
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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