Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_P21
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0167 + 14382976-14385244,14389373-14389842                       29   6.5  
09_04_0574 + 18645363-18645870,18645995-18646491,18646631-186466...    29   6.5  
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642...    29   6.5  
05_07_0108 + 27735783-27736205                                         28   8.6  

>11_04_0167 + 14382976-14385244,14389373-14389842
          Length = 912

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 244 LMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAG-GVCMNTAPPVSPLAT 390
           LM+  N   +  NF     AF+ +   G   ++G G C+NT  P SPL T
Sbjct: 281 LMSLKNVSLSNNNFQGPKPAFAAIP--GQDEDSGNGFCLNTPGPCSPLTT 328


>09_04_0574 +
           18645363-18645870,18645995-18646491,18646631-18646696,
           18646921-18646989,18647401-18647466
          Length = 401

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = +1

Query: 241 QLMTPCNTPATPPNFPDALAAFSRLSTTGSPNNAGGVCMNTAPPVSPLATHXXXXSHQSH 420
           QL      P +P +  D + A       G  N       + APP   +A+H     +QSH
Sbjct: 59  QLQLQQQRPGSPDHAADTVLARFLAGHGGHDNKPPRPAAHFAPPEDSMASHQQQLMYQSH 118

Query: 421 VQ 426
            Q
Sbjct: 119 QQ 120


>01_07_0160 -
           41563109-41563468,41563566-41563985,41564082-41564263,
           41564362-41564542,41565066-41565084,41565185-41565445,
           41566140-41566253,41566264-41566331,41566890-41567018,
           41567141-41567245,41567317-41567456,41567519-41567687,
           41567824-41567900,41568133-41568187,41568660-41568705,
           41568806-41568894,41568996-41569061,41569360-41569425,
           41569817-41569906,41570009-41570026
          Length = 884

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = -1

Query: 742 LGCIIHTIAHKRIRPLEYFXHXXXQSSTLNNVXQVIAAVGSH*LMYVQFIHNSTAHIVHH 563
           L  +I  +A +R+ P   F H   ++    +    I A G     Y    ++++AHI+  
Sbjct: 569 LTILIPAVAKERVSPEFIFTHFNAENGAGIHDKAYILAAGLLMSQYSLIGYDTSAHIIEE 628

Query: 562 XKNKLW 545
            KN  W
Sbjct: 629 TKNADW 634


>05_07_0108 + 27735783-27736205
          Length = 140

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 292 ALAAFSRLSTTGSPNNAGGVCMN 360
           A  A +  +TTG PN+AGG C++
Sbjct: 4   ASKAVAMTATTGRPNDAGGACVD 26


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,556,134
Number of Sequences: 37544
Number of extensions: 388517
Number of successful extensions: 915
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)