Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_P20
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein. 154 5e-37
BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protei... 154 5e-37
AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding prote... 154 5e-37
AL391069-25|CAO72164.1| 349|Homo sapiens selenium binding prote... 154 5e-37
AL391069-29|CAO72167.1| 201|Homo sapiens selenium binding prote... 152 2e-36
U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein ... 142 2e-33
AL391069-28|CAO72166.1| 295|Homo sapiens selenium binding prote... 138 2e-32
BC032997-1|AAH32997.1| 408|Homo sapiens SELENBP1 protein protein. 111 4e-24
AK023875-1|BAB14709.1| 235|Homo sapiens protein ( Homo sapiens ... 111 4e-24
AL391069-26|CAO72165.1| 126|Homo sapiens selenium binding prote... 89 2e-17
AL391069-24|CAO72163.1| 305|Homo sapiens selenium binding prote... 52 2e-06
>CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein.
Length = 472
Score = 154 bits (373), Expect = 5e-37
Identities = 73/141 (51%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
Frame = +1
Query: 166 GPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGWNVC 339
GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR DELHHSGWN C
Sbjct: 21 GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTC 80
Query: 340 SSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS-FNCSFPHTTH 516
SSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + + +F HT+H
Sbjct: 81 SSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSH 140
Query: 517 CLAXGEIMISTMGDENENGXG 579
CLA GE+MIS++GD NG G
Sbjct: 141 CLASGEVMISSLGDVKGNGKG 161
>BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protein 1
protein.
Length = 472
Score = 154 bits (373), Expect = 5e-37
Identities = 73/141 (51%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
Frame = +1
Query: 166 GPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGWNVC 339
GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR DELHHSGWN C
Sbjct: 21 GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTC 80
Query: 340 SSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS-FNCSFPHTTH 516
SSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + + +F HT+H
Sbjct: 81 SSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSH 140
Query: 517 CLAXGEIMISTMGDENENGXG 579
CLA GE+MIS++GD NG G
Sbjct: 141 CLASGEVMISSLGDVKGNGKG 161
>AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding protein
1 protein.
Length = 472
Score = 154 bits (373), Expect = 5e-37
Identities = 73/141 (51%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
Frame = +1
Query: 166 GPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGWNVC 339
GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR DELHHSGWN C
Sbjct: 21 GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTC 80
Query: 340 SSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS-FNCSFPHTTH 516
SSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + + +F HT+H
Sbjct: 81 SSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSH 140
Query: 517 CLAXGEIMISTMGDENENGXG 579
CLA GE+MIS++GD NG G
Sbjct: 141 CLASGEVMISSLGDVKGNGKG 161
>AL391069-25|CAO72164.1| 349|Homo sapiens selenium binding protein
1 protein.
Length = 349
Score = 154 bits (373), Expect = 5e-37
Identities = 73/141 (51%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
Frame = +1
Query: 166 GPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGWNVC 339
GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR DELHHSGWN C
Sbjct: 63 GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTC 122
Query: 340 SSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS-FNCSFPHTTH 516
SSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + + +F HT+H
Sbjct: 123 SSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSH 182
Query: 517 CLAXGEIMISTMGDENENGXG 579
CLA GE+MIS++GD NG G
Sbjct: 183 CLASGEVMISSLGDVKGNGKG 203
>AL391069-29|CAO72167.1| 201|Homo sapiens selenium binding protein
1 protein.
Length = 201
Score = 152 bits (368), Expect = 2e-36
Identities = 72/139 (51%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
Frame = +1
Query: 166 GPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGWNVC 339
GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR DELHHSGWN C
Sbjct: 21 GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTC 80
Query: 340 SSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS-FNCSFPHTTH 516
SSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + + +F HT+H
Sbjct: 81 SSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSH 140
Query: 517 CLAXGEIMISTMGDENENG 573
CLA GE+MIS++GD NG
Sbjct: 141 CLASGEVMISSLGDVKGNG 159
>U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein
protein.
Length = 472
Score = 142 bits (343), Expect = 2e-33
Identities = 70/142 (49%), Positives = 91/142 (64%), Gaps = 4/142 (2%)
Frame = +1
Query: 166 GPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGWNVC 339
GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR DELHHSGWN
Sbjct: 21 GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTY 80
Query: 340 SSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRSFNCSFP--HTT 513
SSC ++ R+ L++P L S +Y VDVG++P +LHKVI+ + + C HT+
Sbjct: 81 SSCFGDSTKSRNKLVLPSLISSRIYVVDVGSEPGPQKLHKVIEPKDIHA-KCELACLHTS 139
Query: 514 HCLAXGEIMISTMGDENENGXG 579
HCLA GE+MIS++GD NG G
Sbjct: 140 HCLASGEVMISSLGDVKGNGKG 161
>AL391069-28|CAO72166.1| 295|Homo sapiens selenium binding protein
1 protein.
Length = 295
Score = 138 bits (335), Expect = 2e-32
Identities = 65/120 (54%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Frame = +1
Query: 223 DYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGWNVCSSCHDNAALKRDLLIMPGLHS 402
DYLATVDVD KS Y QVIHR DELHHSGWN CSSC ++ R L++P L S
Sbjct: 26 DYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLIS 85
Query: 403 CNVYAVDVGTDPRKPRLHKVIDGSKMRS-FNCSFPHTTHCLAXGEIMISTMGDENENGXG 579
+Y VDVG++PR P+LHKVI+ + + +F HT+HCLA GE+MIS++GD NG G
Sbjct: 86 SRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG 145
>BC032997-1|AAH32997.1| 408|Homo sapiens SELENBP1 protein protein.
Length = 408
Score = 111 bits (266), Expect = 4e-24
Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Frame = +1
Query: 307 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 486
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + +
Sbjct: 6 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 65
Query: 487 -FNCSFPHTTHCLAXGEIMISTMGDENENGXG 579
+F HT+HCLA GE+MIS++GD NG G
Sbjct: 66 KCELAFLHTSHCLASGEVMISSLGDVKGNGKG 97
>AK023875-1|BAB14709.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ13813 fis, clone THYRO1000358, moderately
similar to SELENIUM-BINDING LIVER PROTEIN. ).
Length = 235
Score = 111 bits (266), Expect = 4e-24
Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Frame = +1
Query: 307 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 486
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + +
Sbjct: 6 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 65
Query: 487 -FNCSFPHTTHCLAXGEIMISTMGDENENGXG 579
+F HT+HCLA GE+MIS++GD NG G
Sbjct: 66 KCELAFLHTSHCLASGEVMISSLGDVKGNGKG 97
>AL391069-26|CAO72165.1| 126|Homo sapiens selenium binding protein
1 protein.
Length = 126
Score = 89.0 bits (211), Expect = 2e-17
Identities = 42/79 (53%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Frame = +1
Query: 166 GPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGWNVC 339
GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR DELHHSGWN C
Sbjct: 48 GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTC 107
Query: 340 SSCHDNAALKRDLLIMPGL 396
SSC ++ R L++P L
Sbjct: 108 SSCFGDSTKSRTKLVLPSL 126
>AL391069-24|CAO72163.1| 305|Homo sapiens selenium binding protein
1 protein.
Length = 305
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 412 YAVDVGTDPRKPRLHKVIDGSKMRS-FNCSFPHTTHCLAXGEIMISTMGDENENGXG 579
Y V DP+ P+ +VI+ + + +F HT+HCLA GE+MIS++GD NG G
Sbjct: 65 YLATVDVDPKSPQYCQVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG 121
Score = 47.2 bits (107), Expect = 8e-05
Identities = 23/40 (57%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = +1
Query: 166 GPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVI 279
GPREE++Y+ C+ N + DYLATVDVD KS Y QVI
Sbjct: 43 GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVI 82
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,808,744
Number of Sequences: 237096
Number of extensions: 1951227
Number of successful extensions: 3462
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3445
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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