Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_P20
         (892 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016055-1|AAV36940.1|  494|Drosophila melanogaster LP16180p pro...   170   3e-42
AE014297-1628|AAF54900.2|  486|Drosophila melanogaster CG7966-PA...   170   3e-42
AY051481-1|AAK92905.1|  468|Drosophila melanogaster GH14316p pro...   168   1e-41

>BT016055-1|AAV36940.1|  494|Drosophila melanogaster LP16180p
           protein.
          Length = 494

 Score =  170 bits (413), Expect = 3e-42
 Identities = 80/143 (55%), Positives = 101/143 (70%), Gaps = 7/143 (4%)
 Frame = +1

Query: 151 NAFNNGPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTGDELHHS 324
           +A  +GPRE+LLY V V+PN ++   DYL+TVDVD +S TY Q++HRT+T   GDELHHS
Sbjct: 25  DAMRSGPREKLLYTVTVQPNLDEPHGDYLSTVDVDPESPTYCQIVHRTFTNRKGDELHHS 84

Query: 325 GWNVCSSCH-----DNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRSF 489
           GWN CSSC+          KRD L++P L+S  +Y +DV TDPRKP + K IDG  ++S 
Sbjct: 85  GWNACSSCYYVDESSKTVPKRDRLVLPSLNSDFIYILDVVTDPRKPEIVKTIDGDVLKSH 144

Query: 490 NCSFPHTTHCLAXGEIMISTMGD 558
           N + PHTTHCLA G IMIS MGD
Sbjct: 145 NVTAPHTTHCLANGNIMISVMGD 167



 Score = 30.3 bits (65), Expect = 3.7
 Identities = 9/13 (69%), Positives = 13/13 (100%)
 Frame = +3

Query: 114 SCCKGPGYASPLE 152
           +CC+GPGYA+PL+
Sbjct: 13  TCCRGPGYATPLD 25


>AE014297-1628|AAF54900.2|  486|Drosophila melanogaster CG7966-PA
           protein.
          Length = 486

 Score =  170 bits (413), Expect = 3e-42
 Identities = 80/143 (55%), Positives = 101/143 (70%), Gaps = 7/143 (4%)
 Frame = +1

Query: 151 NAFNNGPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTGDELHHS 324
           +A  +GPRE+LLY V V+PN ++   DYL+TVDVD +S TY Q++HRT+T   GDELHHS
Sbjct: 17  DAMRSGPREKLLYTVTVQPNLDEPHGDYLSTVDVDPESPTYCQIVHRTFTNRKGDELHHS 76

Query: 325 GWNVCSSCH-----DNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRSF 489
           GWN CSSC+          KRD L++P L+S  +Y +DV TDPRKP + K IDG  ++S 
Sbjct: 77  GWNACSSCYYVDESSKTVPKRDRLVLPSLNSDFIYILDVVTDPRKPEIVKTIDGDVLKSH 136

Query: 490 NCSFPHTTHCLAXGEIMISTMGD 558
           N + PHTTHCLA G IMIS MGD
Sbjct: 137 NVTAPHTTHCLANGNIMISVMGD 159



 Score = 30.3 bits (65), Expect = 3.7
 Identities = 9/13 (69%), Positives = 13/13 (100%)
 Frame = +3

Query: 114 SCCKGPGYASPLE 152
           +CC+GPGYA+PL+
Sbjct: 5   TCCRGPGYATPLD 17


>AY051481-1|AAK92905.1|  468|Drosophila melanogaster GH14316p
           protein.
          Length = 468

 Score =  168 bits (408), Expect = 1e-41
 Identities = 79/139 (56%), Positives = 99/139 (71%), Gaps = 7/139 (5%)
 Frame = +1

Query: 163 NGPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGWNV 336
           +GPRE+LLY V V+PN ++   DYL+TVDVD +S TY Q++HRT+T   GDELHHSGWN 
Sbjct: 3   SGPREKLLYTVTVQPNLDEPHGDYLSTVDVDPESPTYCQIVHRTFTNRKGDELHHSGWNA 62

Query: 337 CSSCH-----DNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRSFNCSF 501
           CSSC+          KRD L++P L+S  +Y +DV TDPRKP + K IDG  ++S N + 
Sbjct: 63  CSSCYYVDESSKTVPKRDRLVLPSLNSDFIYILDVVTDPRKPEIVKTIDGDVLKSHNVTA 122

Query: 502 PHTTHCLAXGEIMISTMGD 558
           PHTTHCLA G IMIS MGD
Sbjct: 123 PHTTHCLANGNIMISVMGD 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,376,323
Number of Sequences: 53049
Number of extensions: 624979
Number of successful extensions: 1406
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)