Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_P18
         (599 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    29   2.2  
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938     29   3.8  
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    29   3.8  

>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/49 (32%), Positives = 17/49 (34%)
 Frame = -3

Query: 522 GGXXFFPPPXXXXEGGPPFXFXXGXXXKXKXXXXGGGGGVXXFXGGFXG 376
           GG    PP      GG P     G          GGGGG     GG+ G
Sbjct: 369 GGQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGGGGGGGGGGGGGGYTG 417


>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
          Length = 331

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 529 FFFFFFXXXXXXKXXFFFFFF 591
           FFFFFF         FFFFFF
Sbjct: 62  FFFFFFFFFFFFFFFFFFFFF 82



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 529 FFFFFFXXXXXXKXXFFFFFF 591
           FFFFFF         FFFFFF
Sbjct: 63  FFFFFFFFFFFFFFFFFFFFF 83



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 529 FFFFFFXXXXXXKXXFFFFFF 591
           FFFFFF         FFFFFF
Sbjct: 64  FFFFFFFFFFFFFFFFFFFFF 84



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 529 FFFFFFXXXXXXKXXFFFFFF 591
           FFFFFF         FFFFFF
Sbjct: 65  FFFFFFFFFFFFFFFFFFFFF 85



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 529 FFFFFFXXXXXXKXXFFFFFF 591
           FFFFFF         FFFFFF
Sbjct: 66  FFFFFFFFFFFFFFFFFFFFF 86


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 529 FFFFFFXXXXXXKXXFFFFFF 591
           FFFFFF         FFFFFF
Sbjct: 87  FFFFFFFFFFFFFFFFFFFFF 107



 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 529 FFFFFFXXXXXXKXXFFFFFF 591
           FFFFFF         FFFFFF
Sbjct: 88  FFFFFFFFFFFFFFFFFFFFF 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,635,572
Number of Sequences: 37544
Number of extensions: 164234
Number of successful extensions: 855
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)