Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_P17
         (880 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244757-1|BAE96351.1| 1147|Homo sapiens mammalian diaphanous ho...    31   5.5  
AK128093-1|BAC87272.1|  208|Homo sapiens protein ( Homo sapiens ...    30   9.6  

>AB244757-1|BAE96351.1| 1147|Homo sapiens mammalian diaphanous
           homologue 2_splice_variant1 protein.
          Length = 1147

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +1

Query: 733 PSPXXXPPSPLLSXXWPXTGPLVHLSPFGXRGPXSFP 843
           P P   PP PL     P +GP+  L P G  G  + P
Sbjct: 543 PPPPPPPPPPLPGMRMPFSGPVPPLPPLGFLGGQNSP 579


>AK128093-1|BAC87272.1|  208|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46214 fis, clone TESTI4012623. ).
          Length = 208

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
 Frame = +1

Query: 733 PSPXXXPPSPLLSXXWPXTGPLVHLSPFGXRGPXS-FPNPXRXXXPXXG 876
           PSP    P P  S  WP   PL    P   +GP    P+P     P  G
Sbjct: 141 PSPAAPRPLPGTSLTWPSRAPLPRPPPRERQGPGDRSPSPSAPSCPGVG 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,588,728
Number of Sequences: 237096
Number of extensions: 1434928
Number of successful extensions: 8240
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8143
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)