Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_P16
         (975 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4RSI9 Cluster: Chromosome 13 SCAF15000, whole genome s...    39   0.22 
UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    36   1.6  
UniRef50_UPI00004D7E7F Cluster: CDNA FLJ45135 fis, clone BRAWH30...    34   6.3  

>UniRef50_Q4RSI9 Cluster: Chromosome 13 SCAF15000, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 13 SCAF15000, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 307

 Score = 38.7 bits (86), Expect = 0.22
 Identities = 25/75 (33%), Positives = 26/75 (34%)
 Frame = -3

Query: 820 FFFFLFXXGXXPPFXXKNQXSPPFXXXGXXXXXXXXXXXPFFXXPXPFGXPIXPPFFXGX 641
           FFFF F     PPF      SPP+               P F  P P   P  PPF    
Sbjct: 148 FFFFPFSF-FPPPFPPSPPLSPPYFPPPPPLPPPPFPLFPLFPPPPP--PPPPPPFSPPP 204

Query: 640 XPXXPXKXXFPPFFF 596
            P  P     PP FF
Sbjct: 205 PPSPPPSLFSPPPFF 219


>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 35.9 bits (79), Expect = 1.6
 Identities = 21/58 (36%), Positives = 22/58 (37%)
 Frame = -2

Query: 644 GXTPXPXXXXFSPFFFFXXXLXXXKKXKXPXXPGXGGFFFXXKPTPXPPPPXXXKKKK 471
           G  P P       FFFF            P   G GG FF  K    PPPP   +KKK
Sbjct: 43  GGAPPPPPARRQKFFFFPHFFFPP-----PPRRGGGGVFFYKKKRGGPPPPPTTQKKK 95


>UniRef50_UPI00004D7E7F Cluster: CDNA FLJ45135 fis, clone
           BRAWH3038252, highly similar to Formin 1 isoform IV.;
           n=4; Xenopus tropicalis|Rep: CDNA FLJ45135 fis, clone
           BRAWH3038252, highly similar to Formin 1 isoform IV. -
           Xenopus tropicalis
          Length = 1182

 Score = 33.9 bits (74), Expect = 6.3
 Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
 Frame = -1

Query: 786 PPXX*KTKXPPPXXLXGXXXXXXPXXXXPFFXXPPP-----LXTXLXPPFXXGXNPXPPX 622
           PP    +  PPP  L G      P     F   PPP     L +   PP   G  P PP 
Sbjct: 646 PPLPGSSSVPPPPPLPGISSAPPPPPLPGFSSVPPPPPLPDLSSVPPPPPFPGGGP-PPP 704

Query: 621 XPXFP 607
            P FP
Sbjct: 705 PPPFP 709


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,509,056
Number of Sequences: 1657284
Number of extensions: 5025923
Number of successful extensions: 17446
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15899
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 91040045921
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)