Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_P16
         (975 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0638 - 19503580-19503990                                         29   5.6  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   7.4  
11_02_0141 + 8744928-8746187                                           29   7.4  

>10_08_0638 - 19503580-19503990
          Length = 136

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = -2

Query: 527 FXXKPTPXPPPPXXXKKKKKNPP 459
           F  KPTP PPPP   KK    PP
Sbjct: 108 FLRKPTPPPPPP--RKKPPPQPP 128


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 20/66 (30%), Positives = 20/66 (30%)
 Frame = -3

Query: 703 PFFXXPXPFGXPIXPPFFXGXXPXXPXKXXFPPFFFFXXXWXXXKKXXPPXPXGGGXFFX 524
           PF   P PF  P  PP      P  P     PP F F           PP P      F 
Sbjct: 241 PFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFP 300

Query: 523 XXNXPP 506
               PP
Sbjct: 301 FPQLPP 306


>11_02_0141 + 8744928-8746187
          Length = 419

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 536 GFFFXXKPTPXPPPP 492
           G FF   PTP PPPP
Sbjct: 33  GIFFPSTPTPSPPPP 47


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,363,482
Number of Sequences: 37544
Number of extensions: 213542
Number of successful extensions: 1261
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2834967080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)