BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_P15
(872 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-8|CAJ14149.1| 247|Anopheles gambiae putative signal pe... 25 4.0
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 24 5.3
>CR954256-8|CAJ14149.1| 247|Anopheles gambiae putative signal
peptidase protein.
Length = 247
Score = 24.6 bits (51), Expect = 4.0
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 84 YEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDL 263
+EYLG+ + +G + NV+ ++TP + L I K+ + VQ C +
Sbjct: 26 FEYLGD-FVVCVGPSMEPTLMTNNVLITDRITPRLAKLQRGDIIITKSPTKPVQHVCKRI 84
Query: 264 VGRIADR 284
+G DR
Sbjct: 85 IGMPGDR 91
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 24.2 bits (50), Expect = 5.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 218 NGCKSRQEILYWW 180
NG SR++ +YWW
Sbjct: 268 NGATSRRQPVYWW 280
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,655
Number of Sequences: 2352
Number of extensions: 15426
Number of successful extensions: 32
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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