Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_P14
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0044 - 12807372-12807555,12807782-12807840,12807943-128080...    32   0.73 
10_02_0192 + 6517985-6518348,6518647-6518699,6519984-6520021,652...    31   1.3  
06_03_1085 + 27491735-27492754,27492854-27492978,27493088-274932...    29   5.2  
01_06_1125 + 34683184-34684776                                         29   6.8  
09_02_0603 - 11150739-11150746,11150791-11151340                       28   9.0  
03_02_0786 - 11169820-11170158,11170245-11170433,11171173-111714...    28   9.0  
02_05_0686 - 30900748-30902167,30903442-30904742                       28   9.0  
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373...    28   9.0  

>12_02_0044 -
           12807372-12807555,12807782-12807840,12807943-12808072,
           12808160-12808224,12808318-12808506,12808574-12809119,
           12809258-12809497,12809598-12810032
          Length = 615

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
 Frame = +1

Query: 169 RQTRMLLKKDNSLNTLAESAKKTIEELREKVESALAPETVKKKLWHDGRQLQR---IX*K 339
           R TR+  K DN      E+ +  I+E  ++VE+    E+ K+ L    + LQR   +  +
Sbjct: 273 RLTRLFSKSDNGNRITPEAVRAAIKEKTKQVEALKRSESNKEALEAAEQDLQRANALSRQ 332

Query: 340 SEARGSTESLRSNFL-VSKYITP 405
            E   S ES +  F     Y+TP
Sbjct: 333 LEQGASAESSQDEFFHRPAYLTP 355


>10_02_0192 +
           6517985-6518348,6518647-6518699,6519984-6520021,
           6522332-6522717,6523752-6523822,6524620-6524732,
           6525019-6525337,6525576-6525886,6526493-6527069,
           6530483-6530538,6531643-6532126
          Length = 923

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +1

Query: 169 RQTRMLLKKDNSLNTLAESAKK----TIEELREKVESALAPETVKKKLWHDG 312
           R  RM + K N  NT     +K    T++ +RE+   A+    VKKKL H G
Sbjct: 97  RLRRMRISKANKGNTPWNKGRKHTPETLQRIRERTRIAMQDPKVKKKLMHLG 148


>06_03_1085 +
           27491735-27492754,27492854-27492978,27493088-27493232,
           27493328-27493591
          Length = 517

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +1

Query: 190 KKDNSLNTLAESAKKTIEELREKVESALAPETVKKKLWHDGR 315
           ++ N L+ L +  +K + ELR KVE A+    V  KL+ DG+
Sbjct: 49  EESNFLDDLKDGERKALAELRAKVEEAI----VDGKLFDDGK 86


>01_06_1125 + 34683184-34684776
          Length = 530

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = +1

Query: 205 LNTLAESAKKTIEELREKVESALAPETVKKKL---WHDGRQLQRIX*KSEARGSTESLRS 375
           LN   E + K  EE++ K      PE   +++   W  GR+L +      +RG + SLRS
Sbjct: 470 LNGRLEESAKYYEEMKAK---GFPPEKKTEEMIQAWLSGRELAKASASVGSRGGSVSLRS 526

Query: 376 N 378
           N
Sbjct: 527 N 527


>09_02_0603 - 11150739-11150746,11150791-11151340
          Length = 185

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -2

Query: 587 PPPXGXPPPPP 555
           PPP G PPPPP
Sbjct: 38  PPPFGFPPPPP 48


>03_02_0786 -
           11169820-11170158,11170245-11170433,11171173-11171469,
           11171568-11171630,11171884-11171997,11173011-11173091,
           11173176-11173307,11174265-11174363,11174453-11174530,
           11174641-11174901
          Length = 550

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -2

Query: 587 PPPXGXPPPPP 555
           PPP G PPPPP
Sbjct: 31  PPPMGPPPPPP 41


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -2

Query: 587 PPPXGXPPPPP 555
           PPP G PPPPP
Sbjct: 339 PPPKGPPPPPP 349


>01_06_0823 +
           32234588-32234936,32236354-32237093,32237260-32237343,
           32237909-32239263,32240399-32240460,32240544-32241144,
           32241229-32241310,32241778-32241840
          Length = 1111

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -2

Query: 587 PPPXGXPPPPP 555
           PPP G PPPPP
Sbjct: 42  PPPPGVPPPPP 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,981,577
Number of Sequences: 37544
Number of extensions: 320563
Number of successful extensions: 3161
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2947
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)