Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_P13
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 141 1e-34
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 127 2e-30
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 125 8e-30
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 116 6e-27
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 99 7e-22
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 97 3e-21
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 95 9e-21
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 84 2e-17
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 69 1e-12
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 66 9e-12
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 65 1e-11
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 57 3e-09
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 56 5e-09
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 55 2e-08
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 46 7e-06
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 46 1e-05
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 44 4e-05
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 43 5e-05
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 40 4e-04
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 39 0.001
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 36 0.006
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 35 0.014
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 31 0.17
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 1.2
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 29 1.2
SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr 2|... 28 1.6
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 28 2.1
SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces... 27 2.8
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 27 2.8
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 27 2.8
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 27 4.8
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 27 4.8
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 26 6.4
SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces p... 26 6.4
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 26 6.4
SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual 26 6.4
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 26 8.5
SPCC553.12c ||SPCC794.13|conserved fungal protein|Schizosaccharo... 26 8.5
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 141 bits (342), Expect = 1e-34
Identities = 63/114 (55%), Positives = 87/114 (76%), Gaps = 4/114 (3%)
Frame = +3
Query: 255 ESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIG----GKSTK 422
ESY+YL K ++ G +GTGKS LL F+ N++ + HT+G++F S+I+++G K K
Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63
Query: 423 LQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLAXS 584
LQIWDTAGQE+FRSV R+YYRGAAGA+LVYD+T++DSF L++WL D R +A S
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPS 117
Score = 35.1 bits (77), Expect = 0.014
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 607 GXKXDLEDSREVTFTEASXFGXXKXINVFXKPXAKTGEXVEEXFLKL 747
G K DL++ R+V+ EA+ F K I+ + + TG VEE FL +
Sbjct: 125 GSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSV 171
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 127 bits (307), Expect = 2e-30
Identities = 56/105 (53%), Positives = 75/105 (71%)
Frame = +3
Query: 249 MSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQ 428
M+ Y+YLFK L+IG +G GKS LL F + + E TIGV+F + + GK+ KLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Query: 429 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRD 563
IWDTAGQERFR++T SYYRGA G ++VYD+T +DSFN + WL++
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQE 105
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 125 bits (302), Expect = 8e-30
Identities = 56/110 (50%), Positives = 78/110 (70%)
Frame = +3
Query: 255 ESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIW 434
+ Y+YLFK ++IG +G GKS+LL F N+F + TIGVEF ++ + + K K QIW
Sbjct: 5 DEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIW 64
Query: 435 DTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLAXS 584
DTAGQER+R++T +YYRGA GAL+VYDIT + SF+ + WL++ R A S
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADS 114
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 116 bits (278), Expect = 6e-27
Identities = 51/101 (50%), Positives = 70/101 (69%)
Frame = +3
Query: 252 SESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQI 431
++SY+YL K L+IG +G GKS LL F + F TIG++F + + + GK KLQI
Sbjct: 3 TKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQI 62
Query: 432 WDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANW 554
WDTAGQERFR++T +YYRGA G LL+YD+T + SF+ + W
Sbjct: 63 WDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTW 103
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 99.1 bits (236), Expect = 7e-22
Identities = 43/102 (42%), Positives = 68/102 (66%)
Frame = +3
Query: 249 MSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQ 428
M+ ++L K +++G +G GK+S++N ++ KF +D TIG +F +K V + K LQ
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQ 60
Query: 429 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANW 554
+WDTAGQERF+S+ ++YRGA +LVYD+ + SF L +W
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSW 102
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 97.1 bits (231), Expect = 3e-21
Identities = 46/110 (41%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Frame = +3
Query: 249 MSESYEYL---FKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKST 419
MSE+Y + FK + +G GK+SL+ F+ ++F TIG++F SK + + ++
Sbjct: 1 MSENYSFSLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTV 60
Query: 420 KLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDAR 569
+LQ+WDTAGQERFRS+ SY R ++ A++VYDIT+ +SF W+ D R
Sbjct: 61 RLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVR 110
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 95.5 bits (227), Expect = 9e-21
Identities = 41/105 (39%), Positives = 67/105 (63%)
Frame = +3
Query: 249 MSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQ 428
MS K +++G +G GK+ L+N F+ KF + TIG +F +K V + K LQ
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 429 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRD 563
+WDTAGQERF+S+ ++YRGA ++VY++ + SF+++ NW ++
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQE 105
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 84.2 bits (199), Expect = 2e-17
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Frame = +3
Query: 276 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIG-GKSTKLQIWDTAGQE 452
K +++G + GKSSL+ F+ ++F + R TIG F ++ + I S KL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 453 RFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLAXS*YRNFACGXQEXLRRF 632
R++S+ YYR A A++VYDIT S +W+++ + A G + L +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 633 QRSNFY*GKSVWXLXMX*CFXETXCQNRRXC*RXFSEIARK 755
+R+ + F ET + F+ IA+K
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKK 176
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 68.5 bits (160), Expect = 1e-12
Identities = 37/102 (36%), Positives = 56/102 (54%)
Frame = +3
Query: 249 MSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQ 428
M +Y +K +V+G G GKS+L I + F ++ TI + K I G+ L
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKC-EIDGEGALLD 59
Query: 429 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANW 554
+ DTAGQE + ++ Y R G LLVY+ITSR SF+ ++ +
Sbjct: 60 VLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTF 101
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 65.7 bits (153), Expect = 9e-12
Identities = 28/95 (29%), Positives = 48/95 (50%)
Frame = +3
Query: 285 VIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQERFRS 464
+IG + GK+SL+ ++ F E+ T+GV F K ++I IWD GQ F +
Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 74
Query: 465 VTRSYYRGAAGALLVYDITSRDSFNALANWLRDAR 569
+ A L ++D++ + + N++ W R AR
Sbjct: 75 MLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQAR 109
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 64.9 bits (151), Expect = 1e-11
Identities = 28/97 (28%), Positives = 52/97 (53%)
Frame = +3
Query: 273 FKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQE 452
FK +++G GTGK++ + + +F++ T+GVE + +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 453 RFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRD 563
+ + YY ++++D+TSR ++ + +W RD
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRD 106
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 57.2 bits (132), Expect = 3e-09
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +3
Query: 249 MSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQ 428
M +S K +V+G GK+SLL+ F F + T+ + S + GKS +L
Sbjct: 1 MLQSQPIRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDC-RVDGKSVQLA 59
Query: 429 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSF-NALANWLRDARTL 575
+WDTAGQE + + Y A L+ + I S DS N W+ + TL
Sbjct: 60 LWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTL 109
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 56.4 bits (130), Expect = 5e-09
Identities = 33/87 (37%), Positives = 46/87 (52%)
Frame = +3
Query: 276 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 455
+ V+GS GKSSL ++ N F E TI F SK + G+ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIIDTAGQDE 66
Query: 456 FRSVTRSYYRGAAGALLVYDITSRDSF 536
+ + + G G +LVY ITS+ SF
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSF 93
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 54.8 bits (126), Expect = 2e-08
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +3
Query: 276 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 455
K +++G GK+SLLN F F + TI + I + G S +L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIF-VDGNSIELSLWDTAGQEE 73
Query: 456 FRSVTRSYYRGAAGALLVYDITSRDSF-NALANWL 557
+ + Y ++ + + SRDS N + WL
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWL 108
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 46.0 bits (104), Expect = 7e-06
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 276 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 455
K +V+G GK+ LL ++ NKF D T+ + ++ IG + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVM-IGDEPYTLGLFDTAGQED 63
Query: 456 FRSVTRSYYRGAAGALLVYDITSRDSF-NALANW 554
+ + Y L+ + +TS SF N W
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKW 97
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 45.6 bits (103), Expect = 1e-05
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +3
Query: 276 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 455
K +++G GK+ LL F F E T+ + + V + G+ +L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHVELALWDTAGQED 66
Query: 456 FRSVTRSYYRGAAGALLVYDITSRDSF-NALANWLRD 563
+ + Y + L+ + + S DS N W+ +
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISE 103
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 43.6 bits (98), Expect = 4e-05
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +3
Query: 276 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 455
K +++G GK+ LL F F E T+ + + V + G+ +L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHIELALWDTAGQED 66
Query: 456 FRSVTRSYYRGAAGALLVYDITSRDSF-NALANWLRD 563
+ + Y + L+ + + + +S N W+ +
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISE 103
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 43.2 bits (97), Expect = 5e-05
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +3
Query: 276 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIV-NIGGKSTKLQIWDTAGQE 452
K +V+G G GK+ LL F F E T+ + + I K +L +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 453 RFRSVTRSYYRGAAGALLVYDITSRDSFN 539
+ + Y + LL + I S N
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLN 104
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 40.3 bits (90), Expect = 4e-04
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +3
Query: 276 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 455
+ L++G GK+++L K K ++ G + + K+ K +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILY-----KLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDK 77
Query: 456 FRSVTRSYYRGAAGALLVYD 515
R + R Y+ G G + V D
Sbjct: 78 IRPLWRHYFTGTKGLIFVVD 97
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +3
Query: 276 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWDTAGQER 455
+ L++G GK+++L K K T G + + ++ +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILY-----KLKLGEIVTTIPTIGFNVETVEYRNISFTVWDVGGQDK 73
Query: 456 FRSVTRSYYRGAAGALLVYDITSRD 530
R + R Y++ G + V D R+
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDRE 98
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 36.3 bits (80), Expect = 0.006
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Frame = +3
Query: 276 KFLVIGSAGTGKSSLLNNFIGNKFKEDRCH---TIGVEFGSKIVNIGGKSTKLQIWDTAG 446
K L++G +G+GKSS+ + N +D TI +E S + +G + L +WD G
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEH-SHVRFLG--NLVLNLWDCGG 60
Query: 447 QERFR----SVTRSY-YRGAAGALLVYDITSRD 530
QE F S R + +R + V+D+ SR+
Sbjct: 61 QEAFMENYLSAQRDHIFRNVQVLIYVFDVESRE 93
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 35.1 bits (77), Expect = 0.014
Identities = 20/94 (21%), Positives = 40/94 (42%)
Frame = +3
Query: 234 LKVTNMSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGK 413
L + + E + L++G GK+++L + E + FG +I + +
Sbjct: 4 LTILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDVNE-----VSPTFGFQIRTLEVE 58
Query: 414 STKLQIWDTAGQERFRSVTRSYYRGAAGALLVYD 515
+ IWD GQ+ R+ ++Y+ + V D
Sbjct: 59 GLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVD 92
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 285 VIGSAGTGKSSLLNNFIGNKF 347
V+GS TGKS+LLNN G F
Sbjct: 44 VLGSQSTGKSTLLNNLFGTSF 64
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 28.7 bits (61), Expect = 1.2
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +3
Query: 270 LFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTI--GVEFGSKIVNIGGKSTKLQIWDTA 443
+F V+GS GK++LL++FI N +T+ VEF S + + +
Sbjct: 421 VFLCFVVGSKSCGKTALLSSFINNNTNRLTPNTVVNSVEFQS--------TQRYLVLSEI 472
Query: 444 GQERFRSVTRSYYRGAAGAL-LVYDITSRDSFNALANWL 557
G+ + A L L+YD ++ +SF+ +AN L
Sbjct: 473 GETDLDILAEPKSLEACDILCLLYDSSNPNSFSFIANLL 511
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 210 YLNPTRLNLKVTNMSESYEYLFKFLVIGSAGTGKSSLL 323
Y + R +L + N+S S E K ++G +G+GKS+L+
Sbjct: 1108 YPDSERNHLALNNVSLSIEAREKVAIVGISGSGKSTLV 1145
>SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 781
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 282 LVIGSAGTGKSSLLNNFIGNKF 347
+V+GS GKSS+L N +G F
Sbjct: 30 VVVGSQSCGKSSVLENIVGKDF 51
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 273 FKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFG 386
F LV+G +G+GKS+L+N + ++ +FG
Sbjct: 96 FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDFG 133
>SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 735
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 363 HTIGVEFGSKIVNIGGKSTKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDI 518
H + E+G++ VNI G + + W A E + S+ R A GA D+
Sbjct: 663 HRVEAEYGNQGVNIKGVAREGFGWVNASYEVGLTFCNSHMRRALGACTTPDV 714
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 282 LVIGSAGTGKSSLLNNFIGNKF 347
+VIGS +GKSS+L +G++F
Sbjct: 267 VVIGSQSSGKSSVLEAIVGHEF 288
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 285 VIGSAGTGKSSLLNNFIGNKFK 350
+ G G GKSSLL +GN +K
Sbjct: 612 IFGKVGAGKSSLLEACMGNMYK 633
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 69 FFVLL*CHSNKIYSYQYRIYLLNKAIISKLQSYNV 173
FF L C NK + Y I +NK+IIS + ++++
Sbjct: 185 FFDALTCLRNKSLNEDYLIVQVNKSIISTIGAFDL 219
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +3
Query: 267 YLFKFLVIGSAGTGKSSLLN 326
+ F +V+G +G+GKS+L+N
Sbjct: 31 FQFNVMVVGPSGSGKSTLIN 50
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +3
Query: 282 LVIGSAGTGKSSLLNNFIG----NKFKEDRCHTIGVEFGSKI 395
+VIG G+GKSSL++ +G NK + + GV + S++
Sbjct: 645 IVIGPTGSGKSSLISALLGELSLNKGSYNLPRSKGVSYVSQV 686
>SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 472
Score = 26.2 bits (55), Expect = 6.4
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +3
Query: 309 KSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIW-DTAGQERFRSVTR---S 476
K+ +NN N+F+ED C + ++ S + + T+ + D G R S R S
Sbjct: 255 KAEQMNN--ANQFREDVC-ALELDLQSTMPHYSLFHTEGPLRRDLIGLLRAYSYYRFDTS 311
Query: 477 YYRGAA--GALLVYDITSRDSFNALANWL 557
Y G + GALL+ ++ +FN LAN L
Sbjct: 312 YIPGTSFIGALLLLNMNLTSAFNCLANLL 340
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 285 VIGSAGTGKSSLLNNFIGNKFK 350
++G G GKSSLL +GN K
Sbjct: 614 IVGKVGMGKSSLLEACLGNMQK 635
>SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 978
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 29 ESLRFDFFKKKLRIFCSSLMSLKQNLFISIPY 124
E F +KKL+IF ++ S+ +LF S Y
Sbjct: 405 EEAEFQEMRKKLKIFQDTINSIDSSLFSSYMY 436
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +3
Query: 213 LNPTRLNLKVTNMSESYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVE 380
LN L K N+ + E ++ G++GTGK++ N + ++ + E
Sbjct: 11 LNLDSLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKE 66
>SPCC553.12c ||SPCC794.13|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 521
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +2
Query: 437 HSWTGTVSICDQI 475
+SWTGTVS+C+ +
Sbjct: 303 YSWTGTVSLCNLV 315
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,694,078
Number of Sequences: 5004
Number of extensions: 51825
Number of successful extensions: 196
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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