Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_P10
(883 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 178 2e-43
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 175 1e-42
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 171 3e-41
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 149 9e-35
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 148 2e-34
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 124 4e-27
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 121 2e-26
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 120 4e-26
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 119 1e-25
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 116 8e-25
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 113 6e-24
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 111 2e-23
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 108 2e-22
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 105 1e-21
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 94 4e-18
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 91 3e-17
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 91 3e-17
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 90 8e-17
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 82 2e-14
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 78 3e-13
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 77 8e-13
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 75 2e-12
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 74 4e-12
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 73 1e-11
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 73 1e-11
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 72 2e-11
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 70 7e-11
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 70 9e-11
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 68 3e-10
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 68 4e-10
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 66 1e-09
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 65 3e-09
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 64 6e-09
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 61 6e-09
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 62 1e-08
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 62 2e-08
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 59 1e-07
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 56 1e-06
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 56 2e-06
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 55 2e-06
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 55 2e-06
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 54 4e-06
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 46 0.001
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 44 0.005
UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1; Filob... 44 0.007
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 43 0.012
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 39 0.15
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 39 0.15
UniRef50_Q9UKD2 Cluster: mRNA turnover protein 4 homolog; n=30; ... 38 0.45
UniRef50_A7EUH2 Cluster: Predicted protein; n=1; Sclerotinia scl... 37 0.59
UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 36 1.4
UniRef50_A7T9I2 Cluster: Predicted protein; n=1; Nematostella ve... 35 2.4
UniRef50_A7S712 Cluster: Predicted protein; n=1; Nematostella ve... 35 2.4
UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1; ... 35 3.2
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 35 3.2
UniRef50_Q0J8P0 Cluster: Os08g0101500 protein; n=1; Oryza sativa... 35 3.2
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 35 3.2
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_Q9VQB9 Cluster: CG3557-PA; n=1; Drosophila melanogaster... 34 4.2
UniRef50_A3Y9U7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 33 7.3
UniRef50_A1D831 Cluster: RNA-directed RNA polymerase (Sad-1), pu... 33 7.3
UniRef50_Q9UMD9 Cluster: Collagen alpha-1(XVII) chain; n=26; Amn... 33 7.3
UniRef50_A7MPK2 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_A1CZB5 Cluster: Filamentation protein (Rhf1), putative;... 33 9.6
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 178 bits (433), Expect = 2e-43
Identities = 80/95 (84%), Positives = 91/95 (95%)
Frame = +1
Query: 145 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 324
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 325 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDL 95
Score = 176 bits (428), Expect = 7e-43
Identities = 83/115 (72%), Positives = 98/115 (85%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 778
DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L
Sbjct: 157 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETL 211
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 175 bits (426), Expect = 1e-42
Identities = 84/118 (71%), Positives = 100/118 (84%), Gaps = 3/118 (2%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
EVRD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 97 EVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 156
Query: 614 DVHILKPGDKVGASEATL---LNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 778
DV ++KPGDKVGASEATL LNMLNISPFSYGL+++QVYD+G++++PE+LDI + L
Sbjct: 157 DVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDAL 214
Score = 173 bits (421), Expect = 5e-42
Identities = 77/95 (81%), Positives = 90/95 (94%)
Frame = +1
Query: 145 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 324
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 325 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
MRKAI+ HL+NNPALE+LLPHI+GNVGFVFT+ DL
Sbjct: 61 MRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDL 95
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 171 bits (415), Expect = 3e-41
Identities = 79/121 (65%), Positives = 101/121 (83%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTI 601
E ++R+ +L N+V APA+ GAIAP+ V +PA NTGLGPEKTSFFQALSI TKIS+GTI
Sbjct: 93 EDMVDIREIMLSNQVGAPAKAGAIAPVDVFVPASNTGLGPEKTSFFQALSIATKISRGTI 152
Query: 602 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLV 781
EI+++VH++K G+KVGASEATLL ML I PF+YGL + QVYDSG++FAP ILDI +DL+
Sbjct: 153 EILSEVHLIKIGEKVGASEATLLQMLKIFPFTYGLKIVQVYDSGSVFAPSILDITEDDLI 212
Query: 782 Q 784
+
Sbjct: 213 K 213
Score = 145 bits (352), Expect = 1e-33
Identities = 62/96 (64%), Positives = 79/96 (82%)
Frame = +1
Query: 145 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 324
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 325 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLV 432
+RKA++ HL+ NP LEK+LPH+KGN+GFVFT D+V
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMV 96
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 149 bits (361), Expect = 9e-35
Identities = 72/125 (57%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
EV +++ + KV APAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII
Sbjct: 100 EVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLVQ-VQ 790
V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F PE+L++ +DLV+
Sbjct: 160 PVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFA 219
Query: 791 AGVLM 805
AGV M
Sbjct: 220 AGVSM 224
Score = 101 bits (241), Expect = 3e-20
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Frame = +1
Query: 160 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 339
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 340 KDHLD--NNPALEKLLPHIKGNVGFVFTRGDL 429
+ H D N A LLP ++GNVG +FT+GDL
Sbjct: 67 RIHADKTGNQAFLSLLPLLQGNVGLIFTKGDL 98
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 148 bits (359), Expect = 2e-34
Identities = 68/117 (58%), Positives = 91/117 (77%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
EV +++ + KV APAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII
Sbjct: 99 EVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 158
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLVQ 784
V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F+PE+LD+ + LV+
Sbjct: 159 PVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVE 215
Score = 105 bits (252), Expect = 1e-21
Identities = 51/97 (52%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
Frame = +1
Query: 145 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 324
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 325 MRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 429
M+++++ H +N N A+ LLP ++GNVG +FT+GDL
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDL 97
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 124 bits (298), Expect = 4e-27
Identities = 61/116 (52%), Positives = 81/116 (69%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
EV+ + +V APA+ G AP V+IPA TG+ P +TSF Q L I TKI++G I+I+N
Sbjct: 96 EVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVN 155
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLV 781
+VHI+K G KVGASEATLL LNI PF+YGL K +YD+G ++P I + EDL+
Sbjct: 156 EVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSISE---EDLI 208
Score = 71.3 bits (167), Expect = 3e-11
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +1
Query: 172 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 351
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLA 68
Query: 352 DNNPALEKLLPHIKGNVGFVFTRGDL 429
D+ P L+ L ++K N +F + ++
Sbjct: 69 DSKPELDALNTYLKQNTCIIFCKDNI 94
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 121 bits (292), Expect = 2e-26
Identities = 60/110 (54%), Positives = 82/110 (74%)
Frame = +2
Query: 455 ENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKP 634
+++VQAPAR GAIAP V++PA NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L
Sbjct: 111 KHRVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSV 170
Query: 635 GDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLVQ 784
GD+V S ATLL L+ISPF Y + V+ V+D G +F E L I +D+V+
Sbjct: 171 GDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSI-TDDVVE 219
Score = 40.7 bits (91), Expect = 0.048
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Frame = +1
Query: 172 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 351
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 352 DNN--PALEKLLPH-------IKGNVGFVFTRGDL 429
++ A +KLL + + GN +FT ++
Sbjct: 68 EDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEI 102
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 120 bits (290), Expect = 4e-26
Identities = 57/124 (45%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 610
++++ KL E K +PA+ G IAP V++PA +TGL P +T+F QAL+I +KI+KG IEI
Sbjct: 103 YQLKAKLTELKAPSPAKAGVIAPNDVIVPAGDTGLDPTQTNFVQALNIASKITKGQIEIT 162
Query: 611 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLV-QV 787
++ ++K G+KVG S+A LL L I+PF YG V+ VYD+G ++ + LD+ D+V +
Sbjct: 163 SETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDVVYDNGIVYDAKALDLTESDIVKKF 222
Query: 788 QAGV 799
Q GV
Sbjct: 223 QEGV 226
Score = 112 bits (269), Expect = 1e-23
Identities = 52/95 (54%), Positives = 68/95 (71%)
Frame = +1
Query: 145 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 324
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG+ +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 325 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+RKAIK+ + P LE+LLPHIKGNVGF+FT+GDL
Sbjct: 68 IRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDL 102
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 119 bits (286), Expect = 1e-25
Identities = 60/146 (41%), Positives = 87/146 (59%)
Frame = +2
Query: 347 TWTTIQPSRNCCHTSRATLASCSPAETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHN 526
TWT I + L +++D + + +APAR G++A V I A
Sbjct: 86 TWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGG 145
Query: 527 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 706
TGL P++T+FFQ L+IPTKI+K IEI D I+ G+KVG++EA LL LNI+PFSY L
Sbjct: 146 TGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINPFSYKL 205
Query: 707 VVKQVYDSGTIFAPEILDIKPEDLVQ 784
V V+D+G ++ P +LDI E +++
Sbjct: 206 SVAHVFDNGNVYGPGVLDITSESIIE 231
Score = 56.4 bits (130), Expect = 9e-07
Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 18/113 (15%)
Frame = +1
Query: 145 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNT 321
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR +S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 322 MMRKAIKDHLDNN-----------------PALEKLLPHIKGNVGFVFTRGDL 429
+++ A++ + P +E L+ +KGN+G +FT DL
Sbjct: 61 LIKAALQKRISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTNHDL 113
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 116 bits (279), Expect = 8e-25
Identities = 59/118 (50%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
Frame = +2
Query: 434 EVRDKLLENKVQA-PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 610
E+R+ +L+NK + PAR G IAP+ V IP TG+ P TSF ++L I TKI KG IEI
Sbjct: 97 EIRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQ 156
Query: 611 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLVQ 784
VH++K G+KV AS ATLL N++P SYG+ V+ VYD G I+ ++LDI ED+++
Sbjct: 157 EHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDITDEDILE 213
Score = 93.1 bits (221), Expect = 8e-18
Identities = 46/95 (48%), Positives = 60/95 (63%)
Frame = +1
Query: 145 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 324
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 325 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
+R A+K +L P +EKLLP +K N+GFVF + DL
Sbjct: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDL 95
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 113 bits (272), Expect = 6e-24
Identities = 55/117 (47%), Positives = 73/117 (62%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 610
F+++ + ENKV+ PAR GA+AP+ VVIP TG+ P FF AL IPTKI KG I+I
Sbjct: 114 FDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTKIEKGQIQIT 173
Query: 611 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLV 781
D +LK G KVG S+A LL L PF YG+ V YD+G+I + + + D+V
Sbjct: 174 KDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACYDNGSILNKQQVSVNLNDIV 230
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +1
Query: 145 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQI-RISLRGSSIVLMGKNT 321
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q I RI + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 322 MMRKAIKDHLDNNP 363
+ +K + + P
Sbjct: 61 LFKKVLATRVQELP 74
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 111 bits (268), Expect = 2e-23
Identities = 60/147 (40%), Positives = 85/147 (57%)
Frame = +2
Query: 341 KTTWTTIQPSRNCCHTSRATLASCSPAETSFEVRDKLLENKVQAPARPGAIAPLSVVIPA 520
K TWT + R + EV + E+KV A A+ G IAP V +
Sbjct: 76 KNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPNDVHVYP 135
Query: 521 HNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSY 700
TG+ P +TSFFQAL I TKI KG I+I+N++H++ KVG SEA LL L + PFS+
Sbjct: 136 GPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFSF 195
Query: 701 GLVVKQVYDSGTIFAPEILDIKPEDLV 781
GL VK VYD+G++++ E+L + + L+
Sbjct: 196 GLKVKNVYDNGSVYSAEVLKLTNDILL 222
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 17/103 (16%)
Frame = +1
Query: 172 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 351
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
Query: 352 DN-----------------NPALEKLLPHIKGNVGFVFTRGDL 429
P LE L+P ++GNV +F ++
Sbjct: 63 TEPNAEDEDFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEM 105
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 108 bits (259), Expect = 2e-22
Identities = 51/115 (44%), Positives = 76/115 (66%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIN 613
+++ + EN +A A+ G +A V + + TG+ P+KTS+FQAL I TKI+KG +EII+
Sbjct: 119 DIKKAIDENVREACAKVGNVAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIIS 178
Query: 614 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 778
+L GDKVG S+A LL MLNI PF Y + + Q+Y+ G I+ ++DI ED+
Sbjct: 179 PYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVIYDSSLIDIGEEDI 233
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = +1
Query: 145 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 324
M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 325 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGD 426
+R+AI D P L + +KG+V FVF +G+
Sbjct: 85 IRRAIADL--GKPELSGVYDLVKGDVCFVFFKGN 116
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 105 bits (252), Expect = 1e-21
Identities = 53/121 (43%), Positives = 71/121 (58%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 610
F ++ K+ V APAR G +A V+IP TG+ P + +FF ALSI TKI KG IEI
Sbjct: 114 FALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQIEIT 173
Query: 611 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLVQVQ 790
+V + G K+G SE +LL +NI PFSYG+ YD+G I E+L I P ++
Sbjct: 174 KEVQVCTKGKKIGNSEVSLLEKMNIQPFSYGMKCFSDYDNGEILTEEVLSISPSVILDAF 233
Query: 791 A 793
A
Sbjct: 234 A 234
Score = 55.6 bits (128), Expect = 2e-06
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 16/102 (15%)
Frame = +1
Query: 157 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKA 336
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 337 IK---------DHLD-------NNPALEKLLPHIKGNVGFVF 414
++ D P L L+PH+K + +VF
Sbjct: 67 VQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHLKNKIAYVF 108
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 94.3 bits (224), Expect = 4e-18
Identities = 47/114 (41%), Positives = 67/114 (58%)
Frame = +2
Query: 437 VRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIIND 616
++D + N + + A+ GAIAP V++ T + P AL+I KI KGTIEI +
Sbjct: 100 IKDVIDANCLGSAAKVGAIAPCDVILQPQRTSMSPNDIKILHALNIQCKIFKGTIEITGE 159
Query: 617 VHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 778
++ G KVGASEA +LN+L I PF Y L ++ +YD G ++ P IL I E L
Sbjct: 160 KQLIWEGQKVGASEANILNILGIMPFKYTLKIEALYDHGNMYDPSILAITEEVL 213
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 172 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSI-VLMGKNTMMRKAIKDH 348
K +Y K+ L +Y K +V + NV + Q+ IR L VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQL 70
Query: 349 LDNNPALEKLLPHIKGNVGFVFTRGD 426
+ P + +L H+ G +FT G+
Sbjct: 71 KEELPGIRQLEEHLYHGAGLIFTNGN 96
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 91.5 bits (217), Expect = 3e-17
Identities = 46/103 (44%), Positives = 63/103 (61%)
Frame = +2
Query: 455 ENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKP 634
+ K +A A+ G +AP VVI T GP++ F+ AL I TKI+KG IEI+N V+++K
Sbjct: 105 KTKRKAAAKAGIVAPADVVIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKK 164
Query: 635 GDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
GD V S ATLL L I PF Y + +YD G I+ +L+I
Sbjct: 165 GDIVTPSHATLLQRLEIDPFFYAMSALNLYDDGEIYDAAVLEI 207
Score = 73.3 bits (172), Expect = 7e-12
Identities = 41/89 (46%), Positives = 57/89 (64%)
Frame = +1
Query: 160 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 339
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
Query: 340 KDHLDNNPALEKLLPHIKGNVGFVFTRGD 426
+ LD++ L+ LLP+IK NV FVFT GD
Sbjct: 69 -NQLDDD-KLKNLLPYIKLNVAFVFTNGD 95
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 91.1 bits (216), Expect = 3e-17
Identities = 44/116 (37%), Positives = 71/116 (61%)
Frame = -1
Query: 763 DVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLVTGLQDVYIVDDFNSTL*N 584
D+Q+ ++ + ++ L + +T+ EWR+VQ V++ FRS++ +T + D+ + D+FN T N
Sbjct: 121 DIQDGSWEDLTVVVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGN 180
Query: 583 LGRDRKSLEERGLLWTEAGVVGGNDD*QWGNGTRTSWSLDFVLQQFVTDLKRGLRG 416
LG + +SLEER L W GV G N D WGN T + WS + V D+ +G+ G
Sbjct: 181 LGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQGIVG 236
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 89.8 bits (213), Expect = 8e-17
Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEI 607
F++ L +N+ APA+PGA+ P VV+PA T L P QAL IP +I KG + I
Sbjct: 97 FKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTI 156
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLVQV 787
D +LK G+ + A +LN L I P GL V VY+ G ++ P++L I ++ + +
Sbjct: 157 QKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDM 216
Score = 39.5 bits (88), Expect = 0.11
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1
Query: 163 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNTMMRKAI 339
A WK ++ +L+ YP +V ++ + + Q+R +R ++ + +NT++ AI
Sbjct: 5 AEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAI 64
Query: 340 KDHLD--NNPALEKLLPHIKGNVGFVFT 417
K P LEKL+ +I G + T
Sbjct: 65 KKAAKELGKPELEKLVEYIDRGAGILVT 92
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 81.8 bits (193), Expect = 2e-14
Identities = 41/113 (36%), Positives = 64/113 (56%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTI 601
E F +++ L N + A+ G +A V + T + P+ FQ+L+IPTKI KG I
Sbjct: 92 EDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTNISPDGIGIFQSLNIPTKILKGQI 151
Query: 602 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILD 760
EII + +L+ G K+ +EATLL LNI PF + + Y++G + P +L+
Sbjct: 152 EIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKIISFYENGKSYDPSVLN 204
Score = 64.9 bits (151), Expect = 3e-09
Identities = 29/85 (34%), Positives = 52/85 (61%)
Frame = +1
Query: 172 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 351
KS F K L ++ + +V +N+ S+Q+++ + L +SI++ GKNT+++K ++D L
Sbjct: 9 KSLVFKKFNFLFSKFSRLIVVKIENLNSEQIKKCKRLLNNTSILITGKNTLIKKVLRDRL 68
Query: 352 DNNPALEKLLPHIKGNVGFVFTRGD 426
N+ ++L I GNV F+FT D
Sbjct: 69 KNSTLSNEILTKINGNVSFIFTNED 93
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 77.8 bits (183), Expect = 3e-13
Identities = 41/118 (34%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Frame = +2
Query: 446 KLLEN-KVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDV 619
K+LE+ K +APA+ G+IAP +V+PA +T P Q + IP KI KG+I + +D
Sbjct: 96 KILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDA 155
Query: 620 HILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLVQVQA 793
I+ G+++ + A +L L I P G+ + V + TI+ ++L I E+ +Q A
Sbjct: 156 KIVDEGEEIPKAVADILTKLEIHPMEVGIDLLAVCEGDTIYTADVLAIDEEETIQTLA 213
Score = 36.3 bits (80), Expect = 1.0
Identities = 20/86 (23%), Positives = 45/86 (52%)
Frame = +1
Query: 163 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 342
A WK ++ L + + IV ++ ++Q+Q +R SL ++I+ M + ++ A++
Sbjct: 5 ADWKKEKVAELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALE 64
Query: 343 DHLDNNPALEKLLPHIKGNVGFVFTR 420
+ + +E L +++G VFT+
Sbjct: 65 N--SDKEEVEGLADYLEGQPAMVFTK 88
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 76.6 bits (180), Expect = 8e-13
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEI 607
FE+ L + K+ AR G IA +V+PA NTG+ P S F L IPT++ +G+I I
Sbjct: 101 FEILFFLDKQKIMREARAGDIATSEIVLPAGNTGIPPGPMISNFNKLGIPTRVQEGSIWI 160
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
D + KPGD + A LL+ L + P L +K +Y G + +P+ +++
Sbjct: 161 AKDTVVAKPGDVISPELAELLSKLGLKPIESKLQIKTIYLDGKVVSPKDVEL 212
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 75.4 bits (177), Expect = 2e-12
Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIE 604
F + L +NK AR G IA + V +PA NTG+ GP T F +A IPTKI +GTI
Sbjct: 82 FTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIW 140
Query: 605 IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLVQ 784
I+ D +K G+ +G A LL L+I P + ++ + G I++ E L + D+
Sbjct: 141 ILKDTTPVKKGEPIGDKLAPLLGKLDIKPVEAVIALESALEEGVIYSREDLAV---DVEA 197
Query: 785 VQAG 796
++AG
Sbjct: 198 IRAG 201
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 74.1 bits (174), Expect = 4e-12
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEI 607
F++ L E+K AP + GAIAP + + + +TG+ P S +A+ IP I KG I I
Sbjct: 102 FKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGI 161
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLV 781
D + K GD + A +L+ L I P + GL V VY+ G I+ ++L I E+ +
Sbjct: 162 KEDKVVAKEGDVISPKLAVVLSALGIKPVTVGLNVLGVYEEGVIYTSDVLRIDEEEFL 219
Score = 37.1 bits (82), Expect = 0.59
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +1
Query: 163 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 342
A WK + +LL ++ V + Q+Q+IR +R + M +NT++++A++
Sbjct: 11 APWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVE 70
Query: 343 DHLD--NNPALEKLLPHIKGNVGFVFT 417
+ + NP KL+ ++ V T
Sbjct: 71 EVAEETGNPEFAKLVDYLDKGAAIVVT 97
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGT 598
E F++ +++N V+ A+PG + +++PA NTG+ P S F L IPT+I G
Sbjct: 104 ENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGINPGPVLSRFSKLKIPTQIRDGK 163
Query: 599 IEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQV 721
I + D + KPGD V A LL ++N+ P L VK V
Sbjct: 164 IWVARDTQVAKPGDTVTPELADLLRLINVKPVYESLKVKAV 204
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Frame = +1
Query: 148 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRG-SSIVLMGKNT 321
G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 322 MMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGD 426
+MR A+++ LD P LE LL +I+G V F+FT D
Sbjct: 72 LMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLD 106
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEI 607
F++ L E+K APA+PG IAP +V+P T P S Q +P +I G + I
Sbjct: 108 FKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVI 167
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
D ++K G+++ A +L L I P G+ + + GT+F + L I
Sbjct: 168 TKDTVLVKEGEEIDEKTAEILKKLEIEPMEVGVDIVAIVAEGTLFERDDLAI 219
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 72.1 bits (169), Expect = 2e-11
Identities = 36/98 (36%), Positives = 56/98 (57%)
Frame = +2
Query: 485 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEAT 664
G IA +++I L P +T FFQAL IPT+ISK +IEII D+ ++ + S+
Sbjct: 109 GEIAQRNIIIKKGIKNLSPSQTPFFQALGIPTRISKSSIEIIEDILLVSKNQALNKSQEV 168
Query: 665 LLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 778
LL L+I P YG+ +K+++ S +IL + +L
Sbjct: 169 LLKKLDIKPHKYGVKIKKIFSSKGEINLKILQMNNNNL 206
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = +1
Query: 190 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 369
K I LL+ Y IV +N+ S+Q+ IR LRG+S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRW 70
Query: 370 EKLLPHIKGNVGFVFTRGDL 429
+ ++ N+G +FT +L
Sbjct: 71 MSVKEYLSDNIGLIFTNSNL 90
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 70.1 bits (164), Expect = 7e-11
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIE 604
F++ L +NK+ AR G IA + VV+PA NTG+ GP T F +A IPTKI +GTI
Sbjct: 96 FKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIW 154
Query: 605 IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPE--ILDIK 766
I D + G+ + A +L L+I P G+ + + G +A E I+D++
Sbjct: 155 IAKDSTPVLKGEAINEKLAAILGKLDIKPVEAGITLFTALEDGLKYAEEEMIIDVE 210
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 69.7 bits (163), Expect = 9e-11
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGT 598
+ F++ K+ + + APA+PG +A +V+PA +TGL P S F L I T + GT
Sbjct: 102 DNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGT 161
Query: 599 IEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 724
I I D + KPGD + A+LL L I+P + +K Y
Sbjct: 162 IHIAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAY 203
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 68.1 bits (159), Expect = 3e-10
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = +2
Query: 428 SFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIE 604
+FE+ L + K + +PG IA +VIP NTGL P S F L IPT+I +I
Sbjct: 98 AFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRIQGNSIV 157
Query: 605 IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPE--ILDIK 766
I D + KPGD + A+LL L+I+ + +K YD G I + +LD++
Sbjct: 158 ITRDTVVAKPGDTISEELASLLQRLDIALKEVKINIKAAYDHGIIILRDQLVLDLE 213
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 67.7 bits (158), Expect = 4e-10
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGT 598
+ F + +L +K AP G +AP +V+P +TG+ P Q + +I +G+
Sbjct: 96 DNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGS 155
Query: 599 IEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPED 775
I++++D + + G+ V + +L+ L I P GL ++ V+ G +F PE L+I ++
Sbjct: 156 IQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVLFTPEELEIDVDE 214
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/88 (28%), Positives = 48/88 (54%)
Frame = +1
Query: 154 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRK 333
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 334 AIKDHLDNNPALEKLLPHIKGNVGFVFT 417
A+++ D L+ L +++G VG V T
Sbjct: 70 ALEEAGD---GLDTLTEYVEGEVGLVAT 94
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 66.1 bits (154), Expect = 1e-09
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGT 598
E+ F++ L + K +P + GAIAP +++ T P Q+ IP I G
Sbjct: 95 ESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASIDAGK 154
Query: 599 IEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 763
+ + + K G+ V AT+L+ L I P GL ++ YD GTI+ PE+L +
Sbjct: 155 VAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAV 209
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 64.9 bits (151), Expect = 3e-09
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Frame = +2
Query: 401 LASCSPAETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIP 577
+A + E F + + + KV +P +P ++P+ VV+ T + P + Q +P
Sbjct: 85 IAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPPGPLMAELQMAGLP 144
Query: 578 TKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEIL 757
I KG + + ++K G+ V A L L+I P GL VK + DSG I PE L
Sbjct: 145 VAIEKGKVVVKATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVILTPETL 204
Query: 758 DIKPEDLVQ 784
I E +++
Sbjct: 205 AIDTEKVLE 213
Score = 34.7 bits (76), Expect = 3.2
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 190 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 339
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A+
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL 67
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 63.7 bits (148), Expect = 6e-09
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Frame = +2
Query: 413 SPAETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKI 586
S E F++ +E+KV P + G IAP +VIP T + GP +T +AL + TK+
Sbjct: 85 STNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTKV 143
Query: 587 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 691
+ G IEI+ D ++K G+ V A +L L I P
Sbjct: 144 TSGKIEIVEDAVVVKEGEIVSPKVANVLQTLGIKP 178
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 60.9 bits (141), Expect(2) = 6e-09
Identities = 43/80 (53%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +2
Query: 563 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF 742
ALSIP KISKGTIEIINDV ILK GDK ++QVY G+IF
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDK----------------------IEQVY--GSIF 773
Query: 743 APEILDIKPEDL-VQVQAGV 799
+P+ILDIKPEDL + Q GV
Sbjct: 774 SPDILDIKPEDLRAKFQVGV 793
Score = 50.4 bits (115), Expect = 6e-05
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1
Query: 328 RKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLV 432
++AI+ HL+ N L KLLPHIK VGFVFT+GDLV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLV 726
Score = 22.6 bits (46), Expect(2) = 6e-09
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +2
Query: 434 EVRDKLLENKV 466
EVRDKL+E+KV
Sbjct: 727 EVRDKLMESKV 737
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 62.5 bits (145), Expect = 1e-08
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +2
Query: 437 VRDKLLEN-KVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEI 607
+ + EN K++ A PG A VVIPA +TG+ GP S F L + TK+ G + +
Sbjct: 101 ITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAGPI-LSVFGKLKVQTKVQDGKVHV 159
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 772
+ D + KPGD + A +L L I P L +K Y G + E L + E
Sbjct: 160 VKDTVVAKPGDVIPAEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAESLKLDLE 214
Score = 37.1 bits (82), Expect = 0.59
Identities = 22/86 (25%), Positives = 43/86 (50%)
Frame = +1
Query: 163 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 342
A+WK ++ +L+ I + + ++ +IR LRG + + + KNT+ + A K
Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAK 73
Query: 343 DHLDNNPALEKLLPHIKGNVGFVFTR 420
+ +EKL ++ G F+FT+
Sbjct: 74 ---NAGIDIEKLEQYLTGPNVFIFTK 96
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 62.1 bits (144), Expect = 2e-08
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGT 598
E F++ L + K + A+PG AP +VIP T P Q + IP I G
Sbjct: 92 ENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQQVGIPAAIEGGK 151
Query: 599 IEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 772
++I ++K G+ + A L L + P GL+++ Y TIF P++L I E
Sbjct: 152 VKIRETKTVVKKGEVINKKVAEALVKLGVKPMDVGLILQAAYYRETIFTPDLLAIDEE 209
Score = 41.5 bits (93), Expect = 0.027
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +1
Query: 169 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDH 348
WK + +I + ++E+ +V + + Q+QQIR +LRG++ V M +NT++ A+ +
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALNE- 69
Query: 349 LDNNPALEKLLPHIKGNVGFVFT 417
L + A L H +G +FT
Sbjct: 70 LGGSVA--TLNDHAEGQSALIFT 90
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/78 (43%), Positives = 42/78 (53%)
Frame = -3
Query: 416 VNTKPTLPLMCGNSFSRAGLLSRWSLMALRIIVFFPMSTILEPRSEXXXXXXXCEPTLSA 237
V TKPTLPL GN+FS++G + LMAL +VF P+ T P + E TLS
Sbjct: 62 VKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLST 121
Query: 236 PTMKHFGYSSKSWMILTK 183
PT YSSK + L K
Sbjct: 122 PTTNKDLYSSKYSLNLAK 139
Score = 49.6 bits (113), Expect = 1e-04
Identities = 26/47 (55%), Positives = 29/47 (61%)
Frame = -2
Query: 600 IVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTL 460
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATL 47
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 56.0 bits (129), Expect = 1e-06
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEI 607
F++ ++ + KV P +PG A + IP T L P S F L I ++ G I I
Sbjct: 103 FKIVKEVEKEKVAMPVKPGDKAETEIRIPEGMTNLTPGPILSVFGKLRIQYQVRGGKIYI 162
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEIL 757
+ + KPGD + A LL L I P G+ VK D G + ++L
Sbjct: 163 AKETVVAKPGDVISEDLAGLLMALGIRPIEKGVRVKFAIDGGVLITEDLL 212
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 55.6 bits (128), Expect = 2e-06
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Frame = +2
Query: 446 KLLEN-KVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDV 619
K+LE K+ AP + GA+AP+ +VI T L P Q L IP+ I G + +
Sbjct: 97 KVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGPVVGELQNLGIPSGIDGGKVVVKQRK 156
Query: 620 HILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSG--TIFAPEILDI 763
++ G+ V A +L L I P + GL + VYDSG +F+ ++L +
Sbjct: 157 VAVEEGEIVSPELADMLAKLEIYPITEGLDLCAVYDSGESVLFSSDVLHV 206
Score = 38.3 bits (85), Expect = 0.26
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 169 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKA 336
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARS 66
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 55.2 bits (127), Expect = 2e-06
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +2
Query: 422 ETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGT 598
+ F++ L K + A+ G IAP +VIP T P FQ + IP I G
Sbjct: 99 DNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPTSFKPGPLVGEFQQVGIPAGIEGGK 158
Query: 599 IEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 778
+ I + ++K G+K+ A A L L I P GL + + ++ PE L + EDL
Sbjct: 159 VVIKDTKTVVKQGEKISAKLAEALTRLEIMPIDVGLNLMAAVEGHMLYKPEDLGM-DEDL 217
Query: 779 VQ 784
++
Sbjct: 218 LR 219
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEII 610
EV + EN V+ A+PG AP +V+PA T P S F L IPT++ +G I I
Sbjct: 105 EVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGKLKIPTRVQEGKIWIA 164
Query: 611 NDVHILKPGDKVGASEATLLNMLNISP 691
D + K G ++ A +L ++ I P
Sbjct: 165 KDTVVAKAGQEITPEMAEVLRVVGIEP 191
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 54.4 bits (125), Expect = 4e-06
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +2
Query: 431 FEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEI 607
F ++ L K P + GA+AP+ +V+ + T P Q+ IP I G + I
Sbjct: 98 FALKKMLDAEKRPMPIKAGAVAPVDIVVESGETSFSPGPMVGKLQSAGIPAAIKGGKVVI 157
Query: 608 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLVQ 784
V + K GD + A +L ++ I P GL ++ Y +F E L + E +++
Sbjct: 158 NQRVVLAKQGDVITPKVAEVLKLMEIYPKLVGLELRAAYSDRLVFTAEDLAVDTEAVLR 216
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 46.0 bits (104), Expect = 0.001
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = +1
Query: 100 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRI 279
L+ + RS L+++ ++ + K +I + D Y +++ + N+ S QQ+R
Sbjct: 10 LMPRSKRSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRT 68
Query: 280 SLRGSSIVLMGKNTMMRKAIKDHLDNNPALE--KLLPHIKGNVGFVFT 417
S++G + + MGKN +MR A+ + + + +L +KG G +FT
Sbjct: 69 SMKGYARIFMGKNQLMRYALGKTEEESYRTKTWQLGRLLKGMTGLLFT 116
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 44.0 bits (99), Expect = 0.005
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +1
Query: 109 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 288
K R+ L+++ ++++ K F I + + Y CF+ DN+ + ++ +R L
Sbjct: 3 KSKRAKVYNLTQVTKKNREQ-KEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELN 61
Query: 289 GSSIVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGD 426
I GK + +A+ ++ A L+KL ++ G+VG +FT D
Sbjct: 62 DCRI-FFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRD 108
>UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 245
Score = 43.6 bits (98), Expect = 0.007
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +1
Query: 109 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 288
K RS TLS+ K +I + +D+Y C++ ++ + ++++R R
Sbjct: 3 KSKRSKLTTLSKTPVRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQWR 62
Query: 289 GSSIVLMGKNTMMRKAIKD--HLDNNPALEKLLPHIKGNVGFVFT 417
G+ GK +M KA+ + + L ++ +KG +G FT
Sbjct: 63 GTGRFFFGKGKVMAKALGETPETEYQDGLSQIAKRLKGQIGLFFT 107
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 42.7 bits (96), Expect = 0.012
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +1
Query: 118 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 297
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 298 IVLMGKNTMMRKAI--KDHLDNNPALEKLLPHIKGNVGFVFT 417
+ GKN +M+ + + P L KL + G VG +FT
Sbjct: 65 RFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFT 106
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 39.1 bits (87), Expect = 0.15
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +1
Query: 85 SRAFCLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQM 264
S+ C + K R +L+R R+ K ++ + +D Y FI N+ + ++
Sbjct: 2 SKHGCAMPKSKRDRKVSLTRTPRKGLEA-KQALIAELRRCVDTYKHIFIFSVANMRNNKL 60
Query: 265 QQIRISLRGSSIVLMGKNTMMRKAI--KDHLDNNPALEKLLPHIKGNVGFVFT 417
+ +R + + S I GKN +M A+ + + L ++ H++G VG +FT
Sbjct: 61 KDVRNAWKHSRI-FFGKNKVMMVALGREPSSEYRENLHQVSKHLRGEVGLLFT 112
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 39.1 bits (87), Expect = 0.15
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +1
Query: 172 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI--KD 345
K +I + L++Y + N+ + +QQIR G S + +G N +M AI +
Sbjct: 23 KDKLIERIREALEDYSDVYTFQLHNIRTNILQQIREERAGDSRIFLGNNKVMMIAIGRDE 82
Query: 346 HLDNNPALEKLLPHIKGNVGFVFT 417
L KL P + G G +FT
Sbjct: 83 ESAQRQNLHKLSPFLTGLCGLLFT 106
>UniRef50_Q9UKD2 Cluster: mRNA turnover protein 4 homolog; n=30;
Metazoa|Rep: mRNA turnover protein 4 homolog - Homo
sapiens (Human)
Length = 239
Score = 37.5 bits (83), Expect = 0.45
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 566 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 745
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 746 PEILDIKPE 772
++ D PE
Sbjct: 216 QQMGDDLPE 224
>UniRef50_A7EUH2 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 272
Score = 37.1 bits (82), Expect = 0.59
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 282 ATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQGQRWLRVHPRRPR 431
+TW ++A GK N+A + + PG+ P E + WLR+ RP+
Sbjct: 63 STWRTFKAVGKSENNAINFENRPGKLKKPSENTRI-PSRSWLRISSARPK 111
>UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 36.3 bits (80), Expect = 1.0
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 118 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 297
R+ +L+R ++ K K+N K+ EYP +I+G ++ + ++++R +GS
Sbjct: 6 RAKVVSLTRTDKKTKED-KANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLWKGSK 64
Query: 298 IVLMGKNTMMRKAI--KDHLDNNPALEKLLPHIKGNVGFVFT 417
I GK ++ A+ + + + + + G+VG +FT
Sbjct: 65 I-FFGKLKVLALALGMTEEEEVRTGISGISQRLSGDVGLLFT 105
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 35.9 bits (79), Expect = 1.4
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +1
Query: 118 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 297
R +L+++ ++ K T K+N ++ +D+Y FI N+ S + IR + +S
Sbjct: 6 RDKNVSLTKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENS 64
Query: 298 IVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFT 417
GKN ++ A+ + A L K +KG G +FT
Sbjct: 65 RFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFT 106
>UniRef50_A7T9I2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 115
Score = 35.1 bits (77), Expect = 2.4
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 313 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
K T++RK +K HLDN P L K LP + G + + + GDL
Sbjct: 69 KVTIVRKELKSHLDNLPDLSK-LPDVDGGLAPLPSAGDL 106
>UniRef50_A7S712 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 367
Score = 35.1 bits (77), Expect = 2.4
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 313 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
K T++RK +K HLDN P L K LP + G + + + GDL
Sbjct: 321 KVTIVRKELKSHLDNLPDLSK-LPDVDGGLAPLPSAGDL 358
>UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04875.1 - Gibberella zeae PH-1
Length = 506
Score = 34.7 bits (76), Expect = 3.2
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -2
Query: 747 GAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSLMISIVPFEI-LVGI 571
G ++ +Y LT YE GE +N SEA LSP +++ + + +I +
Sbjct: 178 GTLMLLNNYITLTAEAYEKGETYNPPPLDGSEASNLSPSYRIAARIPDKLPQAQIDRLNA 237
Query: 570 ERAWKKEVFSGPRPVLWAGMTTDNGAMAPGR 478
A K V S P + A + G + PGR
Sbjct: 238 MAAQKAAVASDPSIQVLA-LPFRKGEIVPGR 267
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 34.7 bits (76), Expect = 3.2
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 199 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGS--SIVLMGKNTMMRKAIKDHLD 354
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H D
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQHSD 219
>UniRef50_Q0J8P0 Cluster: Os08g0101500 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os08g0101500 protein -
Oryza sativa subsp. japonica (Rice)
Length = 477
Score = 34.7 bits (76), Expect = 3.2
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 300 RAHGKKHNDAQSHQRPPGQQSSPRETVATHQGQRWLRVHPRRPRLRSVTNCWRTKSKLQL 479
R H + H Q H RPP ++ R H+ +R PRRP LR + R +L
Sbjct: 75 RHHPRLHRHLQRHHRPPLRRPHARPAHEVHRRRR-----PRRPLLRHPGDHGRRHPHRRL 129
Query: 480 VLVPLPH 500
+P PH
Sbjct: 130 RPLPRPH 136
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 34.7 bits (76), Expect = 3.2
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 535
EV ++ + KV APAR G ++ + V++P NTGL
Sbjct: 637 EVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 34.3 bits (75), Expect = 4.2
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 535
EV +++ + KV APAR G +A + V++P NT L
Sbjct: 40 EVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_Q9VQB9 Cluster: CG3557-PA; n=1; Drosophila
melanogaster|Rep: CG3557-PA - Drosophila melanogaster
(Fruit fly)
Length = 271
Score = 34.3 bits (75), Expect = 4.2
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +2
Query: 239 PITWARNRCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSP 418
P A + CS S S P S +W C+KPS T +P+R CC + +A L CSP
Sbjct: 77 PAPCAPSPCS-SGSSSAYPSSSAWSTC--CSKPS-TICCYPKPTR-CCASPKAPLVPCSP 131
Query: 419 AET 427
+T
Sbjct: 132 MDT 134
>UniRef50_A3Y9U7 Cluster: Putative uncharacterized protein; n=1;
Marinomonas sp. MED121|Rep: Putative uncharacterized
protein - Marinomonas sp. MED121
Length = 418
Score = 33.5 bits (73), Expect = 7.3
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +1
Query: 106 LKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRIS- 282
+K ++PYA L+ + DKA + + +++LL YP +V D + + I+
Sbjct: 295 IKQAKTPYAALAHQFKTDKAKYDDSSMGLLVKLLGIYPPGTVVQLDTGQFALVISVNINK 354
Query: 283 LRGSSIVLMGKNTMMRKAIKDHLDNNPALE 372
L ++++ + +A+ L+ NP L+
Sbjct: 355 LLAPNVLIYDSSIPKEQAVILDLNENPELK 384
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 33.5 bits (73), Expect = 7.3
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +1
Query: 295 SIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 429
S+ M K+++ +A K NP L+P + GNVG +FT+GDL
Sbjct: 38 SVFAMVKHSIRLRAEKT---GNPVFLNLVPLLVGNVGPIFTKGDL 79
Score = 33.5 bits (73), Expect = 7.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 434 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 535
E +++ + KV APA G +A + V++P NTGL
Sbjct: 81 EADEEVAKYKVGAPAHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A1D831 Cluster: RNA-directed RNA polymerase (Sad-1),
putative; n=6; Trichocomaceae|Rep: RNA-directed RNA
polymerase (Sad-1), putative - Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 1599
Score = 33.5 bits (73), Expect = 7.3
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 380 CH-TSRATLASCSPAETSFEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 538
CH T TL+ + S + K E ++Q+P RP I P V +P + G+G
Sbjct: 303 CHGTYPITLSDGKTSFVSISLDPKRPEVQIQSPVRPNTIYPAEVKLPIASMGIG 356
>UniRef50_Q9UMD9 Cluster: Collagen alpha-1(XVII) chain; n=26;
Amniota|Rep: Collagen alpha-1(XVII) chain - Homo sapiens
(Human)
Length = 1497
Score = 33.5 bits (73), Expect = 7.3
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -2
Query: 789 WTCTRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 610
W+ T +G + +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 221 WSSTLPAGSSMGTYHNNMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>UniRef50_A7MPK2 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 771
Score = 33.1 bits (72), Expect = 9.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 366 PRETVATHQGQRWLRVHPRRPRLRSVTNCWRTKSKLQLVL 485
P + + + RW+RV + RL N W+T S LQL+L
Sbjct: 250 PWDRLTAYNRMRWVRVVEQLVRLNPAYNNWQTGSALQLIL 289
>UniRef50_A1CZB5 Cluster: Filamentation protein (Rhf1), putative; n=6;
Trichocomaceae|Rep: Filamentation protein (Rhf1),
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 1201
Score = 33.1 bits (72), Expect = 9.6
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -2
Query: 525 LWAGMTTDNGAMAPGRA---GAWTLFSNSLSRTSNEVSAGEHEANVALDVWQQ 376
LWA + T+ G +A ++ A LF +L R + + A AN+ LD+W++
Sbjct: 1008 LWADLHTEQGLLAQAQSRPHDAMELFEEALVRDPDHLKATVCLANLLLDIWER 1060
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 949,927,311
Number of Sequences: 1657284
Number of extensions: 20725142
Number of successful extensions: 60785
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 57625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60737
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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