Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_P09
(941 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.44
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.76
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858... 31 1.8
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 31 1.8
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 30 3.1
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 3.1
02_04_0029 + 19036176-19036481,19036602-19036733,19036814-190369... 29 4.1
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 7.1
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 7.1
03_01_0515 - 3864796-3865425 29 7.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 9.4
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +3
Query: 777 GXXSXPXXXPPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
G + P PP +G PPPPP GG +P PPP
Sbjct: 1105 GAGAPPPPPPPGGITGVPPPPP-IGGLGGHQAPPAPPLPEGIGGVPPP 1151
Score = 29.9 bits (64), Expect = 3.1
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = +2
Query: 347 PXXPGGXXGRPXAAXIXXSNXXGXGGGVXRALKXPPPPXGXXXSFRGTXPVPPXXKAXXX 526
P P G G P A G PPPP G P PP A
Sbjct: 1150 PPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPA-PP 1208
Query: 527 XXXXXXXXXPPPXGXXAFPPXPG 595
PPP G P PG
Sbjct: 1209 MPPGVPGGPPPPPGGRGLPAPPG 1231
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -1
Query: 941 PPXGGGXXGGGXXE--GPXPSXPPGXXGPPXXXXXXRGXRXSGXGXRG 804
PP G G GG P P PPG G P RG + G RG
Sbjct: 1188 PPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGL-PAPPGGRG 1234
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.9 bits (69), Expect = 0.76
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +3
Query: 792 PXXXPPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
P PP + PPPPP P+G P PPP
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPP 356
Score = 31.9 bits (69), Expect = 0.76
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
PP G PPPPP P GG+ P PPP
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGP--PPPPP 382
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = +3
Query: 792 PXXXPPXXXSGXPPPPPXXXXXGG--XXSPRGGRXAXP 899
P PP PPPPP GG P+GG P
Sbjct: 353 PPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
>07_03_0446 -
18285132-18285221,18285437-18285499,18285805-18285867,
18286079-18286129,18286413-18286506,18286696-18286856,
18287089-18287145,18287380-18287493,18287934-18287999,
18288063-18288266,18289207-18289284,18289669-18289788,
18290425-18290491,18290635-18290735,18290820-18290936,
18292024-18292107,18292181-18292309,18292385-18292510,
18292622-18292696,18292814-18292947,18293032-18293137,
18293220-18293276,18294387-18294573,18295244-18295407,
18296129-18296353,18296538-18296744,18297043-18297375,
18297604-18297993
Length = 1220
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 865 PLXPGGXXGXGPSXXPPPXXPPP 933
PL PGG P PPP PPP
Sbjct: 12 PLHPGGSSSLLPRKRPPPSPPPP 34
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 828 PPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
PPPPP GG PRG + PPP
Sbjct: 14 PPPPPFGRGGGGAGYPRGHKQLYAPPPPPPP 44
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +3
Query: 348 PQXPGEXVAGPRLPXXXXPTXXGXGGGFXAPXXXPPP 458
P PG + P P G GGG+ P PPP
Sbjct: 722 PYPPGITPSPPEYAPEPPPGPPGGGGGYLPPVVFPPP 758
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
PP G PPPPP GG P P PPP
Sbjct: 363 PPGPGPG-PPPPPGAAGRGGGGPPPPALPGGPRARGPPP 400
>02_04_0029 +
19036176-19036481,19036602-19036733,19036814-19036933,
19037763-19037837,19038282-19038392,19038528-19038635,
19038865-19038933,19038934-19039004,19039095-19039147,
19039223-19039326,19039424-19039696
Length = 473
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSPRGG 884
PP S PPPPP G P GG
Sbjct: 44 PPPSSSSSPPPPPPSSVEGRTKQPGGG 70
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSP 875
PP G PPPPP GG P
Sbjct: 616 PPPRPPGAPPPPPPPGKPGGPPPP 639
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSP 875
PP G PPPPP GG P
Sbjct: 921 PPPRPPGAPPPPPPPGKPGGPPPP 944
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +2
Query: 440 LKXPPPPXGXXXSFRGTXPVPPXXKAXXXXXXXXXXXXPPPXGXXAFPPXP 592
L PPPP S P+PP PPP + PP P
Sbjct: 69 LMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPP 119
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 792 PXXXPPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
P PP G PPPP G P+G PF PPP
Sbjct: 19 PPQPPPMNPYG--PPPPQQPAYGHMPPPQGA--PPPFLAPPPP 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.148 0.507
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,470,121
Number of Sequences: 37544
Number of extensions: 451425
Number of successful extensions: 2341
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2121
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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