Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_P09
         (941 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   7.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
 Frame = +3

Query: 792 PXXXPPXXXSGXPPPPPXXXXXGGXXSP-RGGRXAXPFXXTPP 917
           P   P    +  PP PP     G   SP  GG    P    PP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 3/26 (11%)
 Frame = -1

Query: 941 PPXGGGXXG---GGXXEGPXPSXPPG 873
           PP G G  G    G   GP P  PPG
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPG 537



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = +3

Query: 792 PXXXPPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXP 899
           P   PP    G PP P      GG   P G R   P
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGG---PAGSRPPLP 614


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 911 GXXEGPXPSXPPGXXGPP 858
           G   GP    PPG  GPP
Sbjct: 184 GMPPGPQMMRPPGNVGPP 201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.148    0.507 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,509
Number of Sequences: 2352
Number of extensions: 8611
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)