Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_P09
(941 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.032
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.032
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.032
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.22
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.22
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.22
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.2
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.2
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.6
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 29 4.8
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 4.8
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 4.8
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 4.8
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 29 6.4
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 29 6.4
Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical p... 28 8.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.4
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.3 bits (80), Expect = 0.032
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +3
Query: 792 PXXXPPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
P PP SG PPPPP G PR G P +PPP
Sbjct: 243 PKGSPPLAGSGSPPPPP---AAGSPPPPRTGSPPPPPTGSPPP 282
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
PP +G PPPPP G PR G P PPP
Sbjct: 272 PPPPPTGSPPPPP---AGGSPPPPRAGSPPPP----PPP 303
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 449 PPPPXGXXXSFRGTXPVPPXXKAXXXXXXXXXXXXPPPXGXXAFPPXPG 595
PPPP G+ PP A PPP G PP G
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 792 PXXXPPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
P PP +G PPPP G P R + P PPP
Sbjct: 276 PTGSPPPPPAGGSPPPP---RAGSPPPPPPPRGSPPTGSLPPP 315
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSP--RGGRXAXPFXXTPPP 920
PP S PPPPP G P GG +PPP
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.3 bits (80), Expect = 0.032
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +3
Query: 792 PXXXPPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
P PP SG PPPPP G PR G P +PPP
Sbjct: 264 PKGSPPLAGSGSPPPPP---AAGSPPPPRTGSPPPPPTGSPPP 303
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
PP +G PPPPP G PR G P PPP
Sbjct: 293 PPPPPTGSPPPPP---AGGSPPPPRAGSPPPP----PPP 324
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 449 PPPPXGXXXSFRGTXPVPPXXKAXXXXXXXXXXXXPPPXGXXAFPPXPG 595
PPPP G+ PP A PPP G PP G
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 792 PXXXPPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
P PP +G PPPP G P R + P PPP
Sbjct: 297 PTGSPPPPPAGGSPPPP---RAGSPPPPPPPRGSPPTGSLPPP 336
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSP--RGGRXAXPFXXTPPP 920
PP S PPPPP G P GG +PPP
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.3 bits (80), Expect = 0.032
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +3
Query: 792 PXXXPPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
P PP SG PPPPP G PR G P +PPP
Sbjct: 249 PKGSPPLAGSGSPPPPP---AAGSPPPPRTGSPPPPPTGSPPP 288
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
PP +G PPPPP G PR G P PPP
Sbjct: 278 PPPPPTGSPPPPP---AGGSPPPPRAGSPPPP----PPP 309
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 449 PPPPXGXXXSFRGTXPVPPXXKAXXXXXXXXXXXXPPPXGXXAFPPXPG 595
PPPP G+ PP A PPP G PP G
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 792 PXXXPPXXXSGXPPPPPXXXXXGGXXSPRGGRXAXPFXXTPPP 920
P PP +G PPPP G P R + P PPP
Sbjct: 282 PTGSPPPPPAGGSPPPP---RAGSPPPPPPPRGSPPTGSLPPP 321
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSP--RGGRXAXPFXXTPPP 920
PP S PPPPP G P GG +PPP
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 449 PPPPXGXXXSFRGTXPVPPXXKAXXXXXXXXXXXXPPPXGXXAFPPXP 592
PPPP G G P PP PPP G PP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 859 GGPLXPGGXXGXGP-SXXPPPXXPPPXG 939
GGP P G P S PPP PPP G
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = +3
Query: 777 GXXSXPXXXPPXXXSGXPPPPP--XXXXXGGXXSPRGGRXAXPFXXTPPP 920
G P PP PPPPP GG P P PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 449 PPPPXGXXXSFRGTXPVPPXXKAXXXXXXXXXXXXPPPXGXXAFPPXP 592
PPPP G G P PP PPP G PP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 859 GGPLXPGGXXGXGP-SXXPPPXXPPPXG 939
GGP P G P S PPP PPP G
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = +3
Query: 777 GXXSXPXXXPPXXXSGXPPPPP--XXXXXGGXXSPRGGRXAXPFXXTPPP 920
G P PP PPPPP GG P P PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 449 PPPPXGXXXSFRGTXPVPPXXKAXXXXXXXXXXXXPPPXGXXAFPPXP 592
PPPP G G P PP PPP G PP P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 859 GGPLXPGGXXGXGP-SXXPPPXXPPPXG 939
GGP P G P S PPP PPP G
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = +3
Query: 777 GXXSXPXXXPPXXXSGXPPPPP--XXXXXGGXXSPRGGRXAXPFXXTPPP 920
G P PP PPPPP GG P P PPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 859 GGPLXPGGXXGXGPSXXPPPXXPP 930
G P PGG G GP+ P P PP
Sbjct: 626 GPPRGPGGGGGGGPTGPPAPPKPP 649
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 859 GGPLXPGGXXGXGPSXXPPPXXPP 930
G P PGG G GP+ P P PP
Sbjct: 626 GPPRGPGGGGGGGPTGPPAPPKPP 649
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 941 PPXGGGXXGGGXXEGPX-PSXPPGXXGPP 858
PP G GGG GP P+ PPG G P
Sbjct: 182 PPGPDGAPGGGSGPGPAGPAGPPGPDGNP 210
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 941 PPXGGGXXGGGXXEGPX-PSXPPGXXGPP 858
PP G GGG GP P+ PPG G P
Sbjct: 182 PPGPDGAPGGGSGPGPAGPAGPPGPDGNP 210
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = -1
Query: 938 PXGGGXXGGGXXEGPXPSXPPGXXGPPXXXXXXRGXRXSGXGXRG 804
P G G GP P+ PPG GP G G +G
Sbjct: 221 PGQDGASSAGGEAGPGPAGPPGPAGPAGPDGQSGSGSAGGPGPKG 265
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -1
Query: 938 PXGGGXXGG-GXXEGPXPSXPPGXXGPP 858
P G G G GP P+ PPG GPP
Sbjct: 182 PGGPGPAGSPAGPSGPGPAGPPGPAGPP 209
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 941 PPXGGGXXGGGXXEGPXPSXPPGXXGPP 858
P G G G GP P PPG G P
Sbjct: 246 PAGPDGQSGSGSAGGPGPKGPPGPAGQP 273
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -3
Query: 363 PPGXXGXXKSNGXPXXXKKGFFXSXFFXGGXXXXXFFFXXGGPXPPPXGGGXXXPQXXGX 184
PPG S P GF GG F G P PPP GG P
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFG 112
Query: 183 FPP 175
PP
Sbjct: 113 APP 115
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 932 GGGXXGGGXXEGPXPSXPPGXXGPPXXXXXXRGXRXSGXGXRGG 801
GGG GG G PPG G G R G G GG
Sbjct: 131 GGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGG 174
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSPRGGR--XAXPFXXTPPP 920
PP PPPPP GG P R A P PPP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +3
Query: 804 PPXXXSGXPPPPPXXXXXGGXXSPRGGR--XAXPFXXTPPP 920
PP PPPPP GG P R A P PPP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +3
Query: 792 PXXXPPXXXSGXPPPPPXXXXX--GGXXSPRGGRXAXPFXXTPPP 920
P PP PPPP G P GR A P PPP
Sbjct: 729 PQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPP 773
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 932 GGGXXGGGXXEGPXPSXPPGXXGPP 858
GGG GGG +G PPG G P
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSP 113
>Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical
protein T06D8.9 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = -1
Query: 938 PXGGGXXGGGXXEGPXPSXPP---GXXGPPXXXXXXRGXRXSGXGXRG 804
P G G GGG G PS PP PP RG SG G +G
Sbjct: 189 PGGPGSGGGGGGPGGYPSAPPPYDDYSKPP--PYGFRGDSQSGGGCQG 234
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 932 GGGXXGGGXXEGPXPSXPPGXXGPP 858
GGG GGG +G PPG G P
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSP 113
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 932 GGGXXGGGXXEGPXPSXPPGXXGPP 858
GGG GGG +G PPG G P
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSP 113
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 932 GGGXXGGGXXEGPXPSXPPGXXGPP 858
GGG GGG +G PPG G P
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSP 113
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 932 GGGXXGGGXXEGPXPSXPPGXXGPP 858
GGG GG GP P+ PG G P
Sbjct: 113 GGGSCGGCCPGGPGPNGKPGKPGRP 137
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +1
Query: 859 GGPLXPG-GXXGXGPSXXPPPXXPPPXG 939
GGP+ G G G GP PP P P G
Sbjct: 8 GGPMYGGAGGGGGGPPRGPPQQPPQPQG 35
>Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical
protein C39E9.9 protein.
Length = 276
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -1
Query: 941 PPXGGGXXGGGXXEG-PXPSXPPGXXGP 861
PP G G EG P P PPG GP
Sbjct: 233 PPGAAGLDGERGDEGEPGPEGPPGIPGP 260
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 932 GGGXXGGGXXEGPXPSX-PPGXXGPP 858
GGG GGG P + PPG GPP
Sbjct: 123 GGGGGGGGCQCSPSSNTCPPGPRGPP 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.148 0.507
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,328,102
Number of Sequences: 27780
Number of extensions: 274421
Number of successful extensions: 1904
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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