Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_P04
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 215 3e-56
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 215 3e-56
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 206 2e-53
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 41 0.001
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 41 0.001
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 40 0.002
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 40 0.002
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 39 0.005
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 38 0.010
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 38 0.010
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 38 0.010
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 38 0.013
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 35 0.089
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 33 0.27
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 33 0.27
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 33 0.27
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 33 0.27
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 33 0.27
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 33 0.27
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 33 0.27
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 30 1.9
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 29 3.3
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 29 3.3
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 29 3.3
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 29 5.8
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 29 5.8
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 29 5.8
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 215 bits (526), Expect = 3e-56
Identities = 95/126 (75%), Positives = 111/126 (88%)
Frame = +1
Query: 433 SLRVLQXKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAV 612
S+ Q +YGKRVH+LPIDD++EGLTGNLF+V+L+PYF +AYRP+H+ D F V+ MR V
Sbjct: 107 SISSAQLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTV 166
Query: 613 EFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVE 792
EFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN VGYDD+GG RKQLAQIKEMVE
Sbjct: 167 EFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVE 226
Query: 793 LPLRHP 810
LPLRHP
Sbjct: 227 LPLRHP 232
Score = 116 bits (278), Expect = 3e-26
Identities = 55/97 (56%), Positives = 75/97 (77%)
Frame = +3
Query: 147 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 326
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 327 TVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIA 437
TV IVL+ DNCP++KI+M DVVSI+
Sbjct: 73 TVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSIS 109
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
LFKAIGVKPPRGIL++GPPGT
Sbjct: 234 LFKAIGVKPPRGILLFGPPGT 254
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 830 GVKPPRGILMYGPPG 874
G++P RG+L YGPPG
Sbjct: 512 GMQPSRGVLFYGPPG 526
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 700 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
RE E N + DIGG + +++E+V+ P+ HP
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHP 505
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 215 bits (526), Expect = 3e-56
Identities = 95/126 (75%), Positives = 111/126 (88%)
Frame = +1
Query: 433 SLRVLQXKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAV 612
S+ Q +YGKRVH+LPIDD++EGLTGNLF+V+L+PYF +AYRP+H+ D F V+ MR V
Sbjct: 107 SISSAQLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTV 166
Query: 613 EFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVE 792
EFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN VGYDD+GG RKQLAQIKEMVE
Sbjct: 167 EFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVE 226
Query: 793 LPLRHP 810
LPLRHP
Sbjct: 227 LPLRHP 232
Score = 116 bits (278), Expect = 3e-26
Identities = 55/97 (56%), Positives = 75/97 (77%)
Frame = +3
Query: 147 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 326
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 327 TVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIA 437
TV IVL+ DNCP++KI+M DVVSI+
Sbjct: 73 TVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSIS 109
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
LFKAIGVKPPRGIL++GPPGT
Sbjct: 234 LFKAIGVKPPRGILLFGPPGT 254
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 830 GVKPPRGILMYGPPG 874
G++P RG+L YGPPG
Sbjct: 512 GMQPSRGVLFYGPPG 526
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 700 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
RE E N + DIGG + +++E+V+ P+ HP
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHP 505
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 206 bits (503), Expect = 2e-53
Identities = 87/118 (73%), Positives = 107/118 (90%)
Frame = +1
Query: 457 YGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETD 636
YG R+H+LPIDD++EGLTGNLF+V+LKPYF+EAYRP+H+ D F V+ MR VEFKVVET+
Sbjct: 116 YGTRIHVLPIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETE 175
Query: 637 PSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
P+P CIV+PDT+IH +G+PIKREEEEE++N +GYDD+GG RKQLAQIKEMVELPLRHP
Sbjct: 176 PAPACIVSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHP 233
Score = 123 bits (297), Expect = 1e-28
Identities = 57/101 (56%), Positives = 77/101 (76%)
Frame = +3
Query: 147 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 326
K D+LSTAIL+ K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE
Sbjct: 13 KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72
Query: 327 TVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPS 449
+V I++SD++CP+EK+RM DVVSI P P+
Sbjct: 73 SVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPN 113
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
LFKAIG+KPPRGIL++GPPGT
Sbjct: 235 LFKAIGIKPPRGILLFGPPGT 255
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 830 GVKPPRGILMYGPPG 874
G++P RG+L YGPPG
Sbjct: 513 GMQPSRGVLFYGPPG 527
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 700 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
RE E N + DIGG + +++E+V+ P+ HP
Sbjct: 471 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHP 506
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 43.2 bits (97), Expect = 3e-04
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +1
Query: 736 YDDIGGCRKQLAQIKEMVELPLRHP 810
+DDIGGC Q+ ++KE VELPL HP
Sbjct: 182 FDDIGGCESQIQELKESVELPLTHP 206
Score = 29.5 bits (63), Expect = 3.3
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +2
Query: 818 FKAIGVKPPRGILMYGPPGT 877
++ +G+ P+G+++YG PGT
Sbjct: 209 YEEMGITAPKGVILYGEPGT 228
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 755 VANNWRKLRRWWSCHCVIXSLFKAIGVKPPRGILMYGPPGT 877
+A R+LR + LFK +G+ PP+G L++GPPGT
Sbjct: 147 LAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGT 187
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 688 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
+P+ + E + Y D+GG +Q+ +++E+VELPL +P
Sbjct: 125 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINP 165
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 755 VANNWRKLRRWWSCHCVIXSLFKAIGVKPPRGILMYGPPGT 877
+A R+LR + LFK +G+ PP+G L++GPPGT
Sbjct: 155 LAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGT 195
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 688 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
+P+ + E + Y D+GG +Q+ +++E+VELPL +P
Sbjct: 133 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINP 173
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 730 VGYDDIGGCRKQLAQIKEMVELPLRHP 810
V Y D+GGC+ Q+ +++E+VE PL HP
Sbjct: 174 VTYSDVGGCKDQIEKLREVVETPLLHP 200
Score = 36.7 bits (81), Expect = 0.022
Identities = 11/17 (64%), Positives = 17/17 (100%)
Frame = +2
Query: 827 IGVKPPRGILMYGPPGT 877
+G++PP+G+L+YGPPGT
Sbjct: 206 LGIEPPKGVLLYGPPGT 222
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPG 874
L++ IG+ PPRG+LMYGPPG
Sbjct: 186 LYQQIGIDPPRGVLMYGPPG 205
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 730 VGYDDIGGCRKQLAQIKEMVELPLRH 807
+ Y DIGG Q +++E VELPL H
Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTH 183
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 670 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
V+ D +P+ + E Y D+GG +Q+ +IKE VELPL HP
Sbjct: 165 VLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHP 211
Score = 33.1 bits (72), Expect = 0.27
Identities = 9/20 (45%), Positives = 18/20 (90%)
Frame = +2
Query: 818 FKAIGVKPPRGILMYGPPGT 877
++ +G++PP+G+++YG PGT
Sbjct: 214 YEEMGIRPPKGVILYGCPGT 233
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 37.9 bits (84), Expect = 0.010
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
LF A+G+ P+G+L+YGPPGT
Sbjct: 179 LFDALGIAQPKGVLLYGPPGT 199
Score = 35.1 bits (77), Expect = 0.067
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 736 YDDIGGCRKQLAQIKEMVELPLRHP 810
Y+ +GG Q+ +IKE++ELP++HP
Sbjct: 153 YEMVGGLDTQIKEIKEVIELPVKHP 177
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 37.9 bits (84), Expect = 0.010
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
LF A+G+ P+G+L+YGPPGT
Sbjct: 200 LFDALGIAQPKGVLLYGPPGT 220
Score = 35.1 bits (77), Expect = 0.067
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 736 YDDIGGCRKQLAQIKEMVELPLRHP 810
Y+ +GG Q+ +IKE++ELP++HP
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHP 198
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 37.9 bits (84), Expect = 0.010
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 818 FKAIGVKPPRGILMYGPPGT 877
F +G+ PP+G+LMYGPPGT
Sbjct: 203 FVNLGIHPPKGVLMYGPPGT 222
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 736 YDDIGGCRKQLAQIKEMVELPLRH 807
Y DIGGC KQ+ ++ E V LP+ H
Sbjct: 176 YSDIGGCDKQIQELIEAVVLPMTH 199
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 37.5 bits (83), Expect = 0.013
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 736 YDDIGGCRKQLAQIKEMVELPLRHP 810
Y+ +GG KQ+ +IKE++ELP++HP
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHP 182
Score = 36.3 bits (80), Expect = 0.029
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
LF A+G+ P+G+L++GPPGT
Sbjct: 184 LFDALGIAQPKGVLLFGPPGT 204
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 34.7 bits (76), Expect = 0.089
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 818 FKAIGVKPPRGILMYGPPG 874
F+ G+ PP GIL+YGPPG
Sbjct: 485 FERFGIDPPAGILLYGPPG 503
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 33.1 bits (72), Expect = 0.27
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
+F+ + PP+G++ YGPPGT
Sbjct: 416 VFEKFRINPPKGVVFYGPPGT 436
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 724 NAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
++VG+D +GG + +KE+V P+ +P
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYP 414
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 33.1 bits (72), Expect = 0.27
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
+F+ + PP+G++ YGPPGT
Sbjct: 414 VFEKFRINPPKGVVFYGPPGT 434
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 724 NAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
++VG+D +GG + +KE+V P+ +P
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYP 412
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 33.1 bits (72), Expect = 0.27
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
+F+ + PP+G++ YGPPGT
Sbjct: 416 VFEKFRINPPKGVVFYGPPGT 436
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 724 NAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
++VG+D +GG + +KE+V P+ +P
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYP 414
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 33.1 bits (72), Expect = 0.27
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
+F+ + PP+G++ YGPPGT
Sbjct: 416 VFEKFRINPPKGVVFYGPPGT 436
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 724 NAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
++VG+D +GG + +KE+V P+ +P
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYP 414
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 33.1 bits (72), Expect = 0.27
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
+F+ + PP+G++ YGPPGT
Sbjct: 414 VFEKFRINPPKGVVFYGPPGT 434
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 724 NAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
++VG+D +GG + +KE+V P+ +P
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYP 412
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 33.1 bits (72), Expect = 0.27
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
+F+ + PP+G++ YGPPGT
Sbjct: 416 VFEKFRINPPKGVVFYGPPGT 436
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 724 NAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
++VG+D +GG + +KE+V P+ +P
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYP 414
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 33.1 bits (72), Expect = 0.27
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 815 LFKAIGVKPPRGILMYGPPGT 877
+F+ + PP+G++ YGPPGT
Sbjct: 416 VFEKFRINPPKGVVFYGPPGT 436
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 724 NAVGYDDIGGCRKQLAQIKEMVELPLRHP 810
++VG+D +GG + +KE+V P+ +P
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYP 414
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 33.1 bits (72), Expect = 0.27
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 818 FKAIGVKPPRGILMYGPPG 874
F +GV PPRG +++GPPG
Sbjct: 231 FATLGVDPPRGFIVHGPPG 249
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 33.1 bits (72), Expect = 0.27
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 818 FKAIGVKPPRGILMYGPPG 874
F +GV PPRG +++GPPG
Sbjct: 231 FATLGVDPPRGFIVHGPPG 249
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +1
Query: 736 YDDIGGCRKQLAQIKEMVELPLR 804
+D+IGGC + +A++K+ + LPLR
Sbjct: 79 WDEIGGCEELVAELKDRIILPLR 101
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2
Query: 833 VKPPRGILMYGPPG 874
+ PPRGIL+YGPPG
Sbjct: 111 LSPPRGILLYGPPG 124
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +1
Query: 736 YDDIGGCRKQLAQIKEMVELPLR 804
+D+IGGC + +A++K+ + LPLR
Sbjct: 82 WDEIGGCEELVAELKDRIILPLR 104
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2
Query: 833 VKPPRGILMYGPPG 874
+ PPRGIL+YGPPG
Sbjct: 114 LSPPRGILLYGPPG 127
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 779 RRWWSCHCVIXSLFKAIGVKPPRGILMYGPPGT 877
RR ++ + +G+K RGIL++GPPGT
Sbjct: 309 RRAFASRVFPPEFIEQLGMKHVRGILLFGPPGT 341
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 779 RRWWSCHCVIXSLFKAIGVKPPRGILMYGPPGT 877
RR ++ + +G+K RGIL++GPPGT
Sbjct: 309 RRAFASRVFPPEFIEQLGMKHVRGILLFGPPGT 341
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 779 RRWWSCHCVIXSLFKAIGVKPPRGILMYGPPGT 877
RR ++ + +G+K RGIL++GPPGT
Sbjct: 243 RRAFASRVFPPEFIEQLGMKHVRGILLFGPPGT 275
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 30.3 bits (65), Expect = 1.9
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +2
Query: 839 PPRGILMYGPPGT 877
PP+G+L++GPPGT
Sbjct: 348 PPKGVLLFGPPGT 360
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
protein C10C6.1 protein.
Length = 1565
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 136 WQIIKALMIYRPRSSVARTDPTVSLSKKQSAMT-TQSWHFHRPKWSNFNSSVVTQSCSRA 312
W + R RSS+ +DP +S S S T T S H + SS T S +R
Sbjct: 56 WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANR- 114
Query: 313 NAARKPFASCSQTIIALMR 369
+ A +P S + + L R
Sbjct: 115 SPANRPSLHSSTSPVTLQR 133
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 136 WQIIKALMIYRPRSSVARTDPTVSLSKKQSAMT-TQSWHFHRPKWSNFNSSVVTQSCSRA 312
W + R RSS+ +DP +S S S T T S H + SS T S +R
Sbjct: 56 WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANR- 114
Query: 313 NAARKPFASCSQTIIALMR 369
+ A +P S + + L R
Sbjct: 115 SPANRPSLHSSTSPVTLQR 133
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 818 FKAIGVKPPRGILMYGPPGT 877
+K +G K P+G ++ GPPGT
Sbjct: 318 YKDLGAKIPKGAILTGPPGT 337
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 631 TDPSPFCIVAPDTVIHCDGEPIKREEEEE--ALNAVGYD 741
++P+P VAP+ + E + E+EE A+ +GYD
Sbjct: 153 SNPAPAADVAPEAAAPAEAEALTDEQEENVLAITGMGYD 191
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 161 IIRAFIICHFIQNLLLESKNYYNFY 87
++ AF++C + N+LL SK+ Y FY
Sbjct: 8 LLLAFVVCLTLFNVLLWSKSNYGFY 32
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 818 FKAIGVKPPRGILMYGPPG 874
F +G K PRG L+ GPPG
Sbjct: 310 FTKLGAKLPRGALLTGPPG 328
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 818 FKAIGVKPPRGILMYGPPG 874
F +G K PRG L+ GPPG
Sbjct: 310 FTKLGAKLPRGALLTGPPG 328
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 818 FKAIGVKPPRGILMYGPPGT 877
+ +G + P+G+L+ GPPGT
Sbjct: 226 YSRLGGRLPKGVLLVGPPGT 245
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,009,352
Number of Sequences: 27780
Number of extensions: 419811
Number of successful extensions: 1194
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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