Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_P03
(919 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 116 8e-25
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 78 4e-13
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 73 8e-12
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 66 1e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 44 0.007
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.022
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.089
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 40 0.12
UniRef50_Q9VHB7 Cluster: CG8208-PA, isoform A; n=4; Sophophora|R... 39 0.21
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.4
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 116 bits (279), Expect = 8e-25
Identities = 68/118 (57%), Positives = 73/118 (61%)
Frame = +2
Query: 488 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAXXXXXXXXX 667
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEA
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEA-PSCALLFR 60
Query: 668 XXXXXXTCPPFSLREAWRFLISHSSRXXGISXSGVXSFRXQAGLCAXTPRSSPTXCAF 841
TCPPFSLREAWRFLI+H+ GIS SF +C P SPT +
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHA---VGISVR-CRSFAPSWAVCT-NPPFSPTAAPY 113
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 77.8 bits (183), Expect = 4e-13
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +2
Query: 506 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEA 640
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL A
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAA 88
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 73.3 bits (172), Expect = 8e-12
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +2
Query: 512 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEA 640
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL A
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVA 120
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1
Query: 319 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 417
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 66.1 bits (154), Expect = 1e-09
Identities = 40/60 (66%), Positives = 41/60 (68%)
Frame = -2
Query: 561 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIXLILWITVLPPLSELIPLAAAERP 382
MLVRGAEPMEKR + L V LL CS L LILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 295 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 453
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 97 DPDMIRYIDEFGQTTTRMQ 153
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 43.6 bits (98), Expect = 0.007
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1
Query: 673 PLTGYLSAFLPSGSVALSHIS 735
PLTGYLSAFLPSGSVALSH S
Sbjct: 9 PLTGYLSAFLPSGSVALSHSS 29
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.022
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +2
Query: 221 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 343
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.089
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 365 ERGSGRAPNTQTASPRALADSLMQ 294
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 39.5 bits (88), Expect = 0.12
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 443 RIRXITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTR 622
R I +R + + + P T F S PLT+ITKI Q + +T+ +YK T
Sbjct: 40 RNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTT 99
Query: 623 RFPLEA 640
FPL++
Sbjct: 100 PFPLQS 105
>UniRef50_Q9VHB7 Cluster: CG8208-PA, isoform A; n=4; Sophophora|Rep:
CG8208-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 339
Score = 38.7 bits (86), Expect = 0.21
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +3
Query: 573 TLKSEVAKPDRTIKIPGVSPWKLPRCALPVPTLXAYR---IPVRLSPFGKRGAFSYLIAH 743
T K KP + I IP P K+P CALP P++ YR +P+ ++ G GA S A+
Sbjct: 66 TGKRAEGKP-QDIAIPDFQPGKMPHCALPSPSISLYRCSAMPLPIASGGGNGATSGSAAN 124
Query: 744 A 746
A
Sbjct: 125 A 125
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.9 bits (79), Expect = 1.4
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -2
Query: 588 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIXLILWITVLPPL 418
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 417 SELIPL 400
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.5 bits (73), Expect = 7.7
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -2
Query: 561 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIXLILWITVLPPLSELIPLAAA 391
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.5 bits (73), Expect = 7.7
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -2
Query: 255 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQIN 88
+MNA V + FIAA + +T + AFF L S G ++VSY VW ++
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDLH 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,291,270
Number of Sequences: 1657284
Number of extensions: 14168551
Number of successful extensions: 33937
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 32707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33927
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84031265255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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