Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_P03
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1769 + 29377784-29377878,29377993-29378180,29378340-293784...    29   6.8  
07_03_0537 - 19218461-19218982,19219482-19219868,19219993-192201...    29   6.8  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.0  

>07_03_1769 +
           29377784-29377878,29377993-29378180,29378340-29378472,
           29378580-29378715,29378996-29379072,29379162-29380830,
           29380935-29381018,29381120-29381224,29381302-29381358
          Length = 847

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -2

Query: 186 ITNFTNKAFFSLHSSCGLSKLINVSYHVWIQINPQXKGDPRPRYQ 52
           +  +TN +FF+ HS+C  +KLI+   H+  Q  P+   + +P +Q
Sbjct: 149 LKRYTNPSFFTSHSACS-TKLIHQRIHMAKQ-PPKLLLETKPTFQ 191


>07_03_0537 -
           19218461-19218982,19219482-19219868,19219993-19220154,
           19220464-19221117,19221233-19221277,19223300-19223845,
           19223930-19224307,19224642-19225313,19225373-19225456
          Length = 1149

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +1

Query: 583 QRWRNPTGL*RYQAFPPGSSLXALSLFRPXPLTGYLSAFLPSGSVAL 723
           +RW N T    +  F    SL  +S     P+TG++    P G  A+
Sbjct: 87  ERWNNETNTAHFMGFEMAPSLRDVSYILGIPVTGHVVTAEPIGDEAV 133


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 301 NESAN---ARGEAVCVLGALPLPRSLTRCAR 384
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,658,371
Number of Sequences: 37544
Number of extensions: 424735
Number of successful extensions: 1039
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)