Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_P01
         (946 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...   115   6e-26
U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical pr...    32   0.52 
Z81037-8|CAI79129.1|  217|Caenorhabditis elegans Hypothetical pr...    29   6.4  
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    28   8.5  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    28   8.5  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score =  115 bits (276), Expect = 6e-26
 Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
 Frame = +2

Query: 140 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGT 313
           M IYKDI T DE+ SD++ MKLVD+++YE  G+ V R +G+I + G NPSAEE   D+G+
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60

Query: 314 DSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVXKLEEKAPDQVEV 472
           D  VE G+DIVLNH+LVE   + D   +  Y+K +MK ++  +E+   D+ +V
Sbjct: 61  DEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADV 113



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
 Frame = +3

Query: 516 RFKELQFFTGESMDC---DGMVAMMEYRDFDGTQIPIMMFFKHGL 641
           RFK L FF GE       +G VA++EYRD DGT++P +M  K  +
Sbjct: 132 RFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAI 176


>U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical
           protein EEED8.16 protein.
          Length = 590

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
 Frame = +2

Query: 173 EMFSDTYKMKLVDEVIYEVTG-----RLVTRAQGDIQIEGFNPSAEEADEGTDSAVESGV 337
           E+ S TY +K+  E +++  G     RL+        +E    S    D+      +   
Sbjct: 343 ELTSHTYSLKVGGERVWDYAGDNYVHRLIENGADGKLVEYQRESNASFDDKNQKGGDKLE 402

Query: 338 DIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVXKLEEKAPDQVE 469
            I L + L+ T    D++ Y   L+  M++ + K+E+ A  QVE
Sbjct: 403 GIKLEYTLLLTSQLEDQRKYFEGLRHDMEQTMSKMEKTAYAQVE 446


>Z81037-8|CAI79129.1|  217|Caenorhabditis elegans Hypothetical
           protein C17E4.11 protein.
          Length = 217

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
 Frame = -1

Query: 631 LKNIMIGIC---VPSKSLYSIMATMPSQSMDSPVKN*S-SLNLXE--DVFHYFVHVCFKY 470
           L+NI   IC    P+    S+  T P   + + ++  + S+ + E  D FHY+V+VC K 
Sbjct: 136 LENIFSSICRVLKPNGIFISVSFTQPHFRIPALLREKNWSVEMFEFGDTFHYYVYVCRKG 195

Query: 469 FNLVRRL 449
            +L + L
Sbjct: 196 NSLNKEL 202


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 278  FNPSAEEADEGTDSAVESG-VDIVLNH 355
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 278  FNPSAEEADEGTDSAVESG-VDIVLNH 355
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,313,425
Number of Sequences: 27780
Number of extensions: 264019
Number of successful extensions: 749
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)