Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_O20
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22180-6|CAE17862.1|   77|Caenorhabditis elegans Hypothetical pr...    51   1e-06
Z34801-2|CAD82919.1|  884|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z34801-1|CAA84330.1|  860|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr...    23   7.7  
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ...    23   7.7  

>Z22180-6|CAE17862.1|   77|Caenorhabditis elegans Hypothetical
           protein K11H3.6 protein.
          Length = 77

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 18/42 (42%), Positives = 31/42 (73%)
 Frame = +3

Query: 285 PLVTQISGIKIKGRVRRRCRSCYFVFRDERVYIMCSKFPRHK 410
           P+  + +G K+K R++ RCRSCYF+  + R+++ C++ PRHK
Sbjct: 25  PMCQETAGFKVKSRLKLRCRSCYFLRVEGRLHVECNENPRHK 66


>Z34801-2|CAD82919.1|  884|Caenorhabditis elegans Hypothetical
           protein F59A2.1b protein.
          Length = 884

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 357 VFRDERVYIMCSKFPRHKQMSMKPKPHNTWILT 455
           V R E+V+ +C+ F   K M + PKP+   +LT
Sbjct: 810 VMRREQVHKLCANFRIEKSMKLSPKPNLPNVLT 842


>Z34801-1|CAA84330.1|  860|Caenorhabditis elegans Hypothetical
           protein F59A2.1a protein.
          Length = 860

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 357 VFRDERVYIMCSKFPRHKQMSMKPKPHNTWILT 455
           V R E+V+ +C+ F   K M + PKP+   +LT
Sbjct: 786 VMRREQVHKLCANFRIEKSMKLSPKPNLPNVLT 818


>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
           protein T08A11.1 protein.
          Length = 1872

 Score = 23.4 bits (48), Expect(2) = 7.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 883 NPPPPPP 863
           NPPPPPP
Sbjct: 816 NPPPPPP 822



 Score = 23.0 bits (47), Expect(2) = 7.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 877 PPPPPXXXKKK 845
           PPPPP   KKK
Sbjct: 824 PPPPPSVEKKK 834


>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
           protein T08A11.1 protein.
          Length = 1872

 Score = 23.4 bits (48), Expect(2) = 7.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 883 NPPPPPP 863
           NPPPPPP
Sbjct: 816 NPPPPPP 822



 Score = 23.0 bits (47), Expect(2) = 7.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 877 PPPPPXXXKKK 845
           PPPPP   KKK
Sbjct: 824 PPPPPSVEKKK 834


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,731,596
Number of Sequences: 27780
Number of extensions: 304434
Number of successful extensions: 1359
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)