Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_O15
         (859 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   2.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.3  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 353 IQCDSSLFS*DIRSHLYSISEYSS 424
           I CDSS F  D+ + L +  EY++
Sbjct: 65  INCDSSKFEEDLMNKLPTTPEYNN 88


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 316 EPLLAKPVLAHLSWSNWKGLRANKSPFF 233
           EPL   P L +L    W+ LR+  SP F
Sbjct: 114 EPL--SPHLLNLEVERWRPLRSRLSPIF 139


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 213 AYTPSLIYTIKNFNDQERYFQFSQV 139
           A T +L+  + N+ND+E   +F Q+
Sbjct: 59  ARTFNLVENLDNYNDKEAVNEFMQL 83


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 213 AYTPSLIYTIKNFNDQERYFQFSQV 139
           A T +L+  + N+ND+E   +F Q+
Sbjct: 59  ARTFNLVENLDNYNDKEAVNEFMQL 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,744
Number of Sequences: 438
Number of extensions: 3942
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)