Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_O08
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 43 3e-04
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 43 3e-04
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 40 0.002
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 40 0.002
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 40 0.002
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 40 0.002
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 40 0.002
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 40 0.002
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 40 0.002
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 40 0.002
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 38 0.010
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 38 0.010
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 38 0.010
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 37 0.017
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 36 0.029
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 36 0.051
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 35 0.068
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 34 0.12
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 33 0.21
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.21
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.21
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 33 0.21
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 33 0.27
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 32 0.48
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 29 3.4
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 29 3.4
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 29 3.4
AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm rec... 29 3.4
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 29 4.4
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +3
Query: 429 KASTKRRKTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERK 608
+ S ++ + G + F RR+ LP+ APE+V+S+L++DG LTI A P +G R
Sbjct: 107 EGSHGEKEDTYGTIESTFKRRFPLPKAVAPESVQSQLTADGHLTIDAKAPEPKQ-EGARP 165
Query: 609 VPI 617
+ I
Sbjct: 166 IQI 168
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +3
Query: 441 KRRKTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITA 569
+ R T GI + R Y LPE P TV S L+S GVLTITA
Sbjct: 67 QNRPTEYGIVNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITA 109
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +3
Query: 441 KRRKTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITA 569
+ R T GI + R Y LPE P TV S L+S GVLTITA
Sbjct: 67 QNRPTEYGIVNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITA 109
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = +3
Query: 447 RKTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITA 569
R T GI + R Y LPE P TV S L+S GVLTITA
Sbjct: 66 RPTEYGIVNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITA 106
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 462 GIFQGQFVRRYALPEGAAPETVESRLSSDGVLTI 563
G + FVR+Y LP G PE ++S LS++GVLT+
Sbjct: 94 GQVERHFVRKYNLPTGVRPEQIKSELSNNGVLTV 127
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 317 VGSSIKV--DKDKFQVNLDVQHFAPEEISVKTADGYIVV 427
VG +I V + ++ V++DV F PEE+ V D +++
Sbjct: 44 VGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLII 82
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 462 GIFQGQFVRRYALPEGAAPETVESRLSSDGVLTI 563
G + FVR+Y LP G PE ++S LS++GVLT+
Sbjct: 93 GQVERHFVRKYNLPTGVRPEQIKSELSNNGVLTV 126
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 317 VGSSIKV--DKDKFQVNLDVQHFAPEEISVKTADGYIVV 427
VG +I V + ++ V++DV F PEE+ V D +++
Sbjct: 43 VGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVDNQLII 81
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +3
Query: 450 KTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 623
KT G + F R LPE V S LS DG L+I AP+K +AV+G R +PI Q
Sbjct: 82 KTDHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAVQG-RSIPIQQ 136
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +3
Query: 450 KTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 623
KT G + F R LPE V S LS DG L+I AP+K +AV+G R +PI Q
Sbjct: 82 KTDHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAVQG-RSIPIQQ 136
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 450 KTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 623
KT G + F R LPE V S LS DG L+I AP+K +A++G R +PI Q
Sbjct: 82 KTEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPIQQ 136
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 450 KTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 623
KT G + F R LPE V S LS DG L+I AP+K +A++G R +PI Q
Sbjct: 82 KTEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPIQQ 136
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 450 KTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 623
KT G + F R LPE V S LS DG L+I AP+K +A++G R +PI Q
Sbjct: 82 KTEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPIQQ 136
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 450 KTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 623
KT G + F R LPE V S LS DG L+I AP+K +A++G R +PI Q
Sbjct: 83 KTEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPIQQ 137
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 477 QFVRRYALPEGAAPETVESRLSSDGVLTITAP 572
++ + + LP G PE + S LS+DGVLT+ AP
Sbjct: 69 EYNQEFLLPRGTNPEQISSTLSTDGVLTVEAP 100
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 338 DKDKFQVNLDVQHFAPEEISVKTADGYIVV 427
D ++ DV ++ PEE++VKT D ++V
Sbjct: 24 DGKTLRLRFDVANYKPEEVTVKTIDNRLLV 53
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 477 QFVRRYALPEGAAPETVESRLSSDGVLTITAP 572
++ + + LP G PE + S LS+DGVLT+ AP
Sbjct: 166 EYNQEFLLPRGTNPEQISSTLSTDGVLTVEAP 197
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 338 DKDKFQVNLDVQHFAPEEISVKTADGYIVV 427
D ++ DV ++ PEE++VKT D ++V
Sbjct: 121 DGKTLRLRFDVANYKPEEVTVKTIDNRLLV 150
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 477 QFVRRYALPEGAAPETVESRLSSDGVLTITAP 572
++ + + LP G PE + S LS+DGVLT+ AP
Sbjct: 180 EYNQEFLLPRGTNPEQISSTLSTDGVLTVEAP 211
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 338 DKDKFQVNLDVQHFAPEEISVKTADGYIVV 427
D ++ DV ++ PEE++VKT D ++V
Sbjct: 135 DGKTLRLRFDVANYKPEEVTVKTIDNRLLV 164
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 314 DVGSSIKVDKDKFQVNLDVQHFAPEEISVKTADGYIVV 427
DV S++ D +F V++D F PEEI VKT D +++
Sbjct: 102 DVNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMI 139
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 314 DVGSSIKVDKDKFQVNLDVQHFAPEEISVK 403
++G I D+ KF V LDV HF PE + +K
Sbjct: 43 NIGEQIVNDESKFSVQLDVSHFKPENLKIK 72
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 450 KTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 617
K+ G + F + LPE A +V+S +S++G L I AP+K R +PI
Sbjct: 87 KSEHGYLKRSFSKMILLPEDADLPSVKSAISNEGKLQIEAPKK----TNSSRSIPI 138
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 35.5 bits (78), Expect = 0.051
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 314 DVGSSIKVDKDKFQVNLDVQHFAPEEISVK 403
++G I D+ KF V LDV HF PE++ ++
Sbjct: 43 NIGEQIVNDESKFSVQLDVSHFKPEDLKIE 72
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 441 KRRKTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 617
+ +K+ G + F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 84 QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 138
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 447 RKTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 578
R + G + R Y LP+ TV+S L++ GVLTITA +K
Sbjct: 66 RSDNHGTVAREINRAYKLPDDVDVSTVKSHLATRGVLTITASKK 109
Score = 34.7 bits (76), Expect = 0.089
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 341 KDKFQVNLDVQHFAPEEISVKTADGYIVV 427
K+KF+V LDVQ F P+EI VK + +++
Sbjct: 31 KEKFEVGLDVQFFTPKEIEVKVSGQELLI 59
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 275 YYRPWRHLAAAARDVGSSIKVDKDKFQVNLDVQHFAPEEISVK 403
Y+R H + D I D+ KF V LDV HF PE + +K
Sbjct: 29 YWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPENLKIK 71
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 450 KTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 617
K+ G + F + LPE A +V+S +S++G L I AP+K R +PI
Sbjct: 86 KSEHGYLKRSFSKMILLPEDADLPSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 275 YYRPWRHLAAAARDVGSSIKVDKDKFQVNLDVQHFAPEEISVK 403
Y+R H + D I D+ KF V LDV HF PE++ ++
Sbjct: 21 YWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE 63
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 441 KRRKTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 617
+ +K+ G + F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 75 QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 129
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 275 YYRPWRHLAAAARDVGSSIKVDKDKFQVNLDVQHFAPEEISVK 403
Y+R H + D I D+ KF V LDV HF PE++ ++
Sbjct: 29 YWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE 71
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 441 KRRKTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 617
+ +K+ G + F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 83 QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 275 YYRPWRHLAAAARDVGSSIKVDKDKFQVNLDVQHFAPEEISVK 403
Y+R H + D I D+ KF V LDV HF PE++ ++
Sbjct: 29 YWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE 71
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 441 KRRKTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 617
+ +K+ G + F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 83 QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 275 YYRPWRHLAAAARDVGSSIKVDKDKFQVNLDVQHFAPEEISVK 403
Y+R H + D I D+ KF V LDV HF PE++ ++
Sbjct: 29 YWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE 71
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 441 KRRKTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 617
+ +K+ G + F + LPE +V+S +S++G L I AP+K R +PI
Sbjct: 83 QEKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 450 KTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 617
K+ G + F + LPE A +V+S +S++G L I AP+K R +PI
Sbjct: 40 KSEHGYLKRSFSKMILLPEDADLPSVKSAISNEGKLQIEAPKK----TNSSRSIPI 91
Score = 32.7 bits (71), Expect = 0.36
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 338 DKDKFQVNLDVQHFAPEEISVK 403
D+ KF V LDV HF PE + +K
Sbjct: 4 DESKFSVQLDVSHFKPENLKIK 25
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 462 GIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 578
G R Y LP+G P T++S+L G+L I+ +K
Sbjct: 70 GSITRSITRCYRLPKGTDPATIKSKLDGSGILHISGNKK 108
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 32.3 bits (70), Expect = 0.48
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 480 FVRRYALPEGAAPETVESRLSSDGVLTITAPRK 578
F R+Y++P+ +T+ S L++ GVL I RK
Sbjct: 147 FSRKYSIPDDVHLDTIRSHLTNSGVLIINGSRK 179
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 32.3 bits (70), Expect = 0.48
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 480 FVRRYALPEGAAPETVESRLSSDGVLTITAPRK 578
F R+Y++P+ +T+ S L++ GVL I RK
Sbjct: 147 FSRKYSIPDDVHLDTIRSHLTNSGVLIINGSRK 179
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 323 SSIKVDKDKFQVNLDVQHFAPEEISV 400
S I DKF VNL+V +F PEE+ V
Sbjct: 43 SEIMNSNDKFAVNLNVSNFKPEELKV 68
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 462 GIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 623
G + F R LPE +V + LS+DG L I AP+ + V G R VP+ +
Sbjct: 88 GASRKSFSRMILLPEDVDITSVATNLSNDGKLCIEAPKL--EGVCG-RSVPVKE 138
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 547 TGYSPSLRRGRCPTPSRER-ERCPSHRPVRSQGDQGPERRXXEKEKXK 687
T SP RRG P +R +R RPVR + ++ E R E E+ K
Sbjct: 231 TRRSPPRRRGSPPARGGDRRDRREDRRPVRDEKEREEESRRREIERKK 278
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 447 RKTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITA 569
+K S G R Y LP+ +T++S L S G+L I A
Sbjct: 66 KKDSFGDVSRNITRCYKLPKNVDMKTIKSNLDSHGILHIEA 106
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 338 DKDKFQVNLDVQHFAPEEISVK 403
D D F+V L+ +F P+EI VK
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVK 51
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 447 RKTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITA 569
+K S G R Y LP+ +T++S L S G+L I A
Sbjct: 66 KKDSFGDVSRNITRCYKLPKNVDMKTIKSNLDSHGILHIEA 106
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 338 DKDKFQVNLDVQHFAPEEISVK 403
D D F+V L+ +F P+EI VK
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVK 51
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 338 DKDKFQVNLDVQHFAPEE 391
D+ KF V LDV HF PE+
Sbjct: 5 DESKFSVQLDVSHFKPED 22
>AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm
receptor protein 28 protein.
Length = 338
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 8 FXYCLTLGXPXYFCVXFRSTSXXIQTYKVXSKRFSGVIFNKKQACRCYHISSNXF 172
+ CL G Y + ++S Q K+ + F +I+ C C+HI S F
Sbjct: 213 YVICLVCGFIMYRRIEGNASSTSNQYQKLQHQFFKALIYQLAAPCICFHIPSFFF 267
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 450 KTSTGIFQGQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 575
KT G + F R++ LP+ + + ++ +G +TI AP+
Sbjct: 85 KTEHGFSKRSFTRQFTLPKDVDLAHIHTVINKEGQMTIDAPK 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,516,258
Number of Sequences: 27780
Number of extensions: 277665
Number of successful extensions: 765
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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