Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_O01
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical p... 73 4e-13
AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical ... 73 4e-13
U42439-3|AAA83507.1| 310|Caenorhabditis elegans Hypothetical pr... 33 0.37
AL132952-15|CAE46686.1| 103|Caenorhabditis elegans Hypothetical... 33 0.37
AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical ... 31 1.1
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 30 2.0
>Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 72.5 bits (170), Expect = 4e-13
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +1
Query: 460 VEKAIIELENSPLSNAGYGSNLTWDGTVXCDASLMNGQTLHFGACGAVSNVWNPITLAKN 639
VE A+ +LE N G+GS+LT D V C+AS M+ + L FGA GA+SNV++P +A++
Sbjct: 34 VENALTDLERIEKFNCGFGSHLTIDQEVECEASYMSSKNLSFGAVGAISNVFHPSRVARH 93
Query: 640 LCIKQCDSLSLGRVHLGILTGQGARSWAQRMGLEIVDDHKMISARAFRNF-KHCKRKLKK 816
L +H IL G+GA +A + +++S A +F K+ R L
Sbjct: 94 LAHSNWWK-QRRLLHPLILVGRGAEKYAVKNDFPTCTPEELVSKAAKESFEKYLHRMLHP 152
Query: 817 YSIQNDVKLI 846
Y + V I
Sbjct: 153 YDTHDTVGAI 162
>AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 72.5 bits (170), Expect = 4e-13
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +1
Query: 460 VEKAIIELENSPLSNAGYGSNLTWDGTVXCDASLMNGQTLHFGACGAVSNVWNPITLAKN 639
VE A+ +LE N G+GS+LT D V C+AS M+ + L FGA GA+SNV++P +A++
Sbjct: 34 VENALTDLERIEKFNCGFGSHLTIDQEVECEASYMSSKNLSFGAVGAISNVFHPSRVARH 93
Query: 640 LCIKQCDSLSLGRVHLGILTGQGARSWAQRMGLEIVDDHKMISARAFRNF-KHCKRKLKK 816
L +H IL G+GA +A + +++S A +F K+ R L
Sbjct: 94 LAHSNWWK-QRRLLHPLILVGRGAEKYAVKNDFPTCTPEELVSKAAKESFEKYLHRMLHP 152
Query: 817 YSIQNDVKLI 846
Y + V I
Sbjct: 153 YDTHDTVGAI 162
>U42439-3|AAA83507.1| 310|Caenorhabditis elegans Hypothetical
protein F19C7.3 protein.
Length = 310
Score = 32.7 bits (71), Expect = 0.37
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -2
Query: 523 GLIHNQHCL-MDCFPIQLWLFQLHPQHFHLVLRFR*LFCRPDCMFSDTLFLNFHCDIRR 350
G I +H L MDC I+LW QLHPQ L+ +F + + L LN CD RR
Sbjct: 191 GDITLKHLLSMDCKVIKLWRHQLHPQ---LINQFIYHWMKGAMPNLRRLRLNLFCDFRR 246
>AL132952-15|CAE46686.1| 103|Caenorhabditis elegans Hypothetical
protein Y51H4A.25b protein.
Length = 103
Score = 32.7 bits (71), Expect = 0.37
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 325 NGFIAVHCGAGYHSENLRKEYQK 393
+G++ +HC A YH N + YQK
Sbjct: 57 SGYLGIHCEADYHHSNAERSYQK 79
>AL032644-1|CAA21666.2| 604|Caenorhabditis elegans Hypothetical
protein Y51H1A.2 protein.
Length = 604
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 430 LKQGGNAVDAVEKAIIELENSPLSNAGYGSNL-TWDGTVXCDASLMNGQTLHFGACGAVS 606
L G+ + + + L + P+S A S L TW T A LM+GQ L G A
Sbjct: 162 LLSDGDQSERIRGLLKPLSSLPISAATNSSFLNTWTPTPLILAGLMDGQPLKVGTLKARP 221
Query: 607 NVWNPITLAKNLCIKQCDSL 666
N P L + + I D+L
Sbjct: 222 NP-KPAHLTEEIAIPAIDAL 240
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 334 IAVHCGAGYHSENLRKEYQKTCNQACRKASEILKQGGNAVDAVEKAIIELENSP 495
+A+ A +L K QKT + ++A E+ GNAV VE + + +N P
Sbjct: 4059 VALRDRAAKFVSDLEKNIQKTGDDE-KRADELKNDDGNAVKNVEDVVSKYQNQP 4111
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 334 IAVHCGAGYHSENLRKEYQKTCNQACRKASEILKQGGNAVDAVEKAIIELENSP 495
+A+ A +L K QKT + ++A E+ GNAV VE + + +N P
Sbjct: 3156 VALRDRAAKFVSDLEKNIQKTGDDE-KRADELKNDVGNAVKNVEDVVSKYQNQP 3208
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 334 IAVHCGAGYHSENLRKEYQKTCNQACRKASEILKQGGNAVDAVEKAIIELENSP 495
+A+ A +L K QKT + ++A E+ GNAV VE + + +N P
Sbjct: 5013 VALRDRAAKFVSDLEKNIQKTGDDE-KRADELKNDVGNAVKNVEDVVSKYQNQP 5065
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 334 IAVHCGAGYHSENLRKEYQKTCNQACRKASEILKQGGNAVDAVEKAIIELENSP 495
+A+ A +L K QKT + ++A E+ GNAV VE + + +N P
Sbjct: 5916 VALRDRAAKFVSDLEKNIQKTGDDE-KRADELKNDVGNAVKNVEDVVSKYQNQP 5968
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 334 IAVHCGAGYHSENLRKEYQKTCNQACRKASEILKQGGNAVDAVEKAIIELENSP 495
+A+ A +L K QKT + ++A E+ GNAV VE + + +N P
Sbjct: 6819 VALRDRAAKFVSDLEKNIQKTGDDE-KRADELKNDVGNAVKNVEDVVSKYQNQP 6871
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 334 IAVHCGAGYHSENLRKEYQKTCNQACRKASEILKQGGNAVDAVEKAIIELENSP 495
+A+ A +L K QKT + ++A E+ GNAV VE + + +N P
Sbjct: 7722 VALRDRAAKFVSDLEKNIQKTGDDE-KRADELKNDVGNAVKNVEDVVSKYQNQP 7774
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,231,950
Number of Sequences: 27780
Number of extensions: 372893
Number of successful extensions: 892
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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