Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_N22
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0731 - 27213777-27215177,27218188-27218405,27218504-27218648     30   2.1  
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788...    30   2.8  
08_01_0673 - 5805218-5805349,5805936-5806026,5806416-5806471,580...    29   4.9  
08_01_1068 + 10899965-10900129,10900408-10900562,10900688-109009...    29   6.5  

>03_05_0731 - 27213777-27215177,27218188-27218405,27218504-27218648
          Length = 587

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -2

Query: 459 LHPCRPTISATCSEDGTGTHSVMFCDFLVRSSG-GGANPSGLPSG 328
           LHP    +  TCS+  +G  +V+F  F     G  G  P  +P G
Sbjct: 135 LHPAECGVGETCSKATSGQFAVLFMSFAFLVLGSAGIRPCSMPFG 179


>03_06_0209 - 32377045-32378008,32378086-32378210,32378772-32378816,
            32379009-32379295,32379778-32381509,32381631-32381971,
            32383753-32383876,32384484-32384722,32385156-32385534
          Length = 1411

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -2

Query: 456  HPCRPTISATCSEDGTGTHSVMFCDFLVRSSGGGANPSGLPSGCSPASCRPGSACSAP 283
            HP     SAT  +D     ++  C F   +S   A P  LPS    +S +P +A  AP
Sbjct: 1082 HPMSAAQSATEDDDEVARAAMPLCSFYASTSLPVAKPHSLPSS---SSSKPYTATPAP 1136


>08_01_0673 -
           5805218-5805349,5805936-5806026,5806416-5806471,
           5806571-5806852,5806924-5807057,5807088-5807163,
           5807247-5807747,5808454-5809037,5809579-5809597
          Length = 624

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +2

Query: 374 TKKSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIK 499
           T+ S +    + VP+S+  A ++G+ G  IK LR+ +  +IK
Sbjct: 139 TRDSDDEEANILVPASQS-ASVIGKSGAVIKRLRSTSKAFIK 179


>08_01_1068 +
           10899965-10900129,10900408-10900562,10900688-10900996,
           10901870-10901939,10902504-10902802,10904305-10904724,
           10906063-10906324
          Length = 559

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 158 SLVLNKKIIDGVRSIVLRCAFVHVGRVCSRRSALRNS 48
           ++V N   +DG  S V RC+ V   R CS  S L+ S
Sbjct: 260 TVVGNHSDVDGAASTVRRCSSVANSRCCSAHSRLQAS 296


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,747,097
Number of Sequences: 37544
Number of extensions: 314089
Number of successful extensions: 1077
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)