Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_N20
         (904 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0514 - 3718795-3718860,3719349-3719524,3719785-3719877,371...    58   1e-08
11_03_0158 + 10911997-10912078,10912203-10912288,10913780-109138...    29   3.8  

>02_01_0514 -
           3718795-3718860,3719349-3719524,3719785-3719877,
           3719961-3720111
          Length = 161

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
 Frame = +1

Query: 187 IEQDGSANVKKYFDPY---IVENNSQELSATFRGHPLDGTQMTFPEGYRAVLVTETK--- 348
           I+Q+G+A V  YF P    +     +   A FRG  L G  ++ P+GYR  ++ +     
Sbjct: 33  IKQNGAAAVSDYFKPKDTGVEVEGIRVEEAFFRGRKLQGATISLPDGYRGYVLEKRSGGK 92

Query: 349 -RPLTEDAERKFQVTGGFKNFTYWNWDKKPSKNDDLCKAMDWIEIAEAIH 495
                E     F+    F+N TYWN D  PS  D L +    + +A A+H
Sbjct: 93  DMKKLEGEVSNFKSRAEFQNITYWNHDTTPSAEDPLPRCFHLLTVANAMH 142


>11_03_0158 +
           10911997-10912078,10912203-10912288,10913780-10913857,
           10913967-10914098,10914385-10914435,10914529-10914669,
           10914754-10914876,10914989-10915066,10915448-10915541,
           10915633-10915739,10915936-10916019,10916649-10916744,
           10916835-10917023,10917705-10917780,10918507-10918610,
           10918708-10918967,10920000-10920086,10920184-10920411,
           10920752-10920826,10921264-10921346,10921552-10921661
          Length = 787

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 340 ETKRPLTEDAERKFQVTGGFKNFTYWNWDKKPSKNDDLCK 459
           E + PL   A+R+F    G K+F   +WD K S   D  +
Sbjct: 477 EVETPLDVPAKRRFAKYRGLKSFRTSSWDPKESLPQDYAR 516


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,807,614
Number of Sequences: 37544
Number of extensions: 224342
Number of successful extensions: 479
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)