Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_N17
(899 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical p... 47 2e-05
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 45 6e-05
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 45 6e-05
U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases... 43 3e-04
U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,... 43 3e-04
Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical pr... 38 0.013
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 4.5
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 4.5
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 4.5
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 4.5
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 4.5
AC025724-6|AAG23373.2| 158|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical
protein ZK892.2 protein.
Length = 118
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +1
Query: 355 ALRSSNT*RSLXEAMQTDQDNLIEKVRGIYGFKVRNGPDGAEGYWVINAKEGKGKVTYNG 534
A +S + E + TD++ +++KV + + G DG W I+AK V +
Sbjct: 2 AFKSDVIFEEIKERIATDKE-MVKKVGTSFRMTIA-GADGKTKVWTIDAKSDTPYVGDDS 59
Query: 535 SEKPDVTFTISDEDVADLISGKLNPQKAFFQGK 633
S ++ I D D + +GK+ P +AF QGK
Sbjct: 60 SRPVEIEINIKDSDFIAIAAGKMKPDQAFMQGK 92
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 45.2 bits (102), Expect = 6e-05
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +3
Query: 219 REVPRARIALQHNLGLGGAVVITMYRKGFSNVTPNNV 329
R+VP ++A+QHN+G+GGA V+ +YR GF + +
Sbjct: 376 RQVPNCKVAMQHNIGIGGAGVVGLYRLGFPGAAQSKI 412
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 45.2 bits (102), Expect = 6e-05
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +3
Query: 219 REVPRARIALQHNLGLGGAVVITMYRKGFSNVTPNNV 329
R+VP ++A+QHN+G+GGA V+ +YR GF + +
Sbjct: 376 RQVPNCKVAMQHNIGIGGAGVVGLYRLGFPGAAQSKI 412
>U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases,
short chain protein6 protein.
Length = 418
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 415 NLIEKVRGIYGFKVRNGPDGAEGYWVINAKEGKGKVT-YNGSEKPDVTFTISDEDVADLI 591
++++K +Y F +++ +E ++ K G+G +T S K DV FT++ E A L
Sbjct: 320 DIVKKTGFVYEFLLKDPTTKSERIITLDLKNGEGALTDKKASGKADVKFTLAPEHFAPLF 379
Query: 592 SGKLNPQKAFFQGKDQDPG 648
+GKL P A K Q G
Sbjct: 380 TGKLRPTTALMTKKLQISG 398
>U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,
short chain protein28 protein.
Length = 436
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = +1
Query: 358 LRSSNT*RSLXEAMQTDQDNLIEKVRGIYGFKVRNGPDGAEGYWVINAKEGKGKV---TY 528
+RSS + + + ++ D ++ ++ I + + +G + G + ++ K V
Sbjct: 319 IRSSALFQEMADGVKADP-TAVKTLKSIVLYIITDGKNEL-GKFTLDFKSASPSVYLGDV 376
Query: 529 NGSEKPDVTFTISDEDVADLISGKLNPQKAFFQGK 633
EK + T T++D D D+ +GKLN QKAF GK
Sbjct: 377 KNGEKANATVTVADSDFVDIAAGKLNAQKAFMSGK 411
>Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical
protein T03D8.6 protein.
Length = 578
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 442 YGFKVRNGPDGAEGYWVINAKEGKGKVTYNGSEKPDVTFTISDEDVADLISGKLNPQKAF 621
YGFK P GYW I K G GKVT+ +P V V+ ++ + ++
Sbjct: 125 YGFKAAGTPGEIAGYWHIFKKFGSGKVTWKELVQPSVKLAREGHPVSPYLATVMKVKERH 184
Query: 622 FQ 627
F+
Sbjct: 185 FR 186
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 416 T*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT*P 556
T KS S + ++ + + TG +++K+ KSPT K+P P
Sbjct: 1431 TKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKP 1477
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 416 T*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT*P 556
T KS S + ++ + + TG +++K+ KSPT K+P P
Sbjct: 1431 TKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKP 1477
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 416 T*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT*P 556
T KS S + ++ + + TG +++K+ KSPT K+P P
Sbjct: 1431 TKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKP 1477
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 416 T*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT*P 556
T KS S + ++ + + TG +++K+ KSPT K+P P
Sbjct: 1431 TKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKP 1477
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 395 PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT*PSRSAT 571
P PT T + KS +T + T+++ P + K+ +PTT PT P+ T
Sbjct: 247 PTTPTTPT-TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTT 304
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 395 PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT*PSRSAT 571
P PT T + KS +T + T+++ P + K+ +PTT PT P+ T
Sbjct: 361 PTTPTTPT-TMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTT 418
>AC025724-6|AAG23373.2| 158|Caenorhabditis elegans Hypothetical
protein Y67D8C.7 protein.
Length = 158
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 547 DVTFTISDEDVADLISGKLNPQKAFFQGKDQDPGQHGAG 663
+V + +ED+ D K+ ++ + QG Q ++G G
Sbjct: 60 EVQLDVEEEDIGDAAQPKMRVRRGYSQGGGQKKSKYGGG 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,632,756
Number of Sequences: 27780
Number of extensions: 389099
Number of successful extensions: 1111
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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