Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_N14
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    33   0.40 
05_04_0432 + 21178662-21178798,21178973-21179033,21179260-211793...    30   2.1  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   3.8  
06_03_0824 + 25105450-25105482,25105649-25106485,25106580-251067...    29   5.0  
03_02_0225 + 6565337-6565369,6565564-6565734,6566113-6566400,656...    29   5.0  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +3

Query: 576 CWRFPIGSAPLTSITKIDAQXRGGEXRXDYKDXSRXPLETPSCALLFXP 722
           CWR  +        T  D Q    +    +KD S  P + PSC L+F P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIP 331


>05_04_0432 +
           21178662-21178798,21178973-21179033,21179260-21179339,
           21179650-21179794,21180411-21180620,21180956-21181004,
           21181199-21181326
          Length = 269

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
 Frame = +1

Query: 697 PRAPSCSXPAXYXIPVRFPPFGKRGAXPXPXPXGSPXRXRSSXXXGL-GSQP 849
           PR+P CS P+   +P R P   +        P   P   R S   G  G QP
Sbjct: 7   PRSPCCSLPSARVLPSRLPLLPRPAPAALSAPAARPVVARVSSLPGCDGHQP 58


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/57 (33%), Positives = 22/57 (38%)
 Frame = +1

Query: 673 PAVXPWKXPRAPSCSXPAXYXIPVRFPPFGKRGAXPXPXPXGSPXRXRSSXXXGLGS 843
           P   P K P  P    P     P   PP GK+G  P P P G   R  ++     GS
Sbjct: 345 PPPPPAKGPPPPP--PPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVPTGS 399


>06_03_0824 +
           25105450-25105482,25105649-25106485,25106580-25106738,
           25106830-25106886,25106971-25107202,25107338-25107638,
           25107703-25107976,25108051-25108152,25108244-25108525
          Length = 758

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +3

Query: 579 WRFPIGSAPLTSITKIDAQXRGGEXRXDYKDXSRXPLETPSCALLFXP 722
           WR  +        T  D Q    +    +KD S  P + PSC L+F P
Sbjct: 622 WRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIP 669


>03_02_0225 +
           6565337-6565369,6565564-6565734,6566113-6566400,
           6566495-6566653,6566745-6566801,6566886-6567117,
           6567253-6567553,6567618-6567891,6567966-6568067,
           6568159-6568440
          Length = 632

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +3

Query: 579 WRFPIGSAPLTSITKIDAQXRGGEXRXDYKDXSRXPLETPSCALLFXP 722
           WR  +        T  D Q    +    +KD S  P + PSC L+F P
Sbjct: 496 WRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIP 543


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 408 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 563
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 357 NESAN---ARGEAVCVLGALPLPRSLTRCAR 440
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,155,703
Number of Sequences: 37544
Number of extensions: 351362
Number of successful extensions: 868
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)