Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_N09
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0826 - 32252546-32253208                                         31   0.93 
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.6  
10_08_0223 - 15986763-15987575                                         30   2.1  
07_01_0710 - 5355277-5355666                                           29   4.9  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  

>01_06_0826 - 32252546-32253208
          Length = 220

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +1

Query: 583 EVAKPDRTIKIPGVSPWKLPRALSCSDPXRLPDTCPPFSPSGSVALSHSS 732
           EV+KP R +   G     LP  L+C    +     PP SP+G  A S SS
Sbjct: 5   EVSKPSRRLSPKGSFKLSLPSLLACGQ-CKATAVSPPESPTGVGARSFSS 53


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +3

Query: 519 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP--XPLTGYLSA 692
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   PL   L A
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQPLHYSLYA 342

Query: 693 F 695
           F
Sbjct: 343 F 343


>10_08_0223 - 15986763-15987575
          Length = 270

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
 Frame = -1

Query: 704 EGEKGGQVSGKRXGSEQESARGSFQGE-TPGIFIVLSGFATS--DLSVDFCDARQGGGA- 537
           EG  GG   G   GS   +  G  QG    G  I ++   +S  D +  + DA  GGG  
Sbjct: 138 EGGGGGGGGGSNGGSGYGAGAGVGQGAGESGSSIAMAPSPSSGGDYNGGYADAAGGGGGG 197

Query: 536 ---YGKTPATRPFYGSWPFAG 483
              +G  PA  P YG    AG
Sbjct: 198 GGGHGGGPAASPSYGVGAGAG 218


>07_01_0710 - 5355277-5355666
          Length = 129

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -2

Query: 721 KAPRFPKGRKADRYPV--SGQGRNRRAHEGASRGKRLV 614
           + P  P G   +R     SG+GR RR  EGA  G  LV
Sbjct: 88  RGPLAPAGESRERTSAANSGEGRRRRVAEGARDGSGLV 125


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 299 NESAN---ARGEAVCVLGALPLPRSLTRCAR 382
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,917,814
Number of Sequences: 37544
Number of extensions: 513583
Number of successful extensions: 1525
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)