Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_N06
         (923 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    32   0.021
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            32   0.028
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    30   0.086
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    29   0.20 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.35 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.9  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   7.5  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   7.5  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   9.9  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   9.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 32.3 bits (70), Expect = 0.021
 Identities = 30/103 (29%), Positives = 32/103 (31%), Gaps = 13/103 (12%)
 Frame = +1

Query: 526 RAGXVXPXPP--PPPXXKPXXPXXGGG---GGXXXPPXGXGXAXPPKXGRXPGXXPXGP- 687
           R G + P PP  P P      P    G   G    PP   G   PP  G+ P   P  P 
Sbjct: 213 RPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPM 272

Query: 688 -XPRRGXXXTXXXXXG------XXTPXPPPPXXXLXPXXPPXG 795
             PR           G         P PP P     P  PP G
Sbjct: 273 GGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPPQG 315



 Score = 27.5 bits (58), Expect = 0.61
 Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
 Frame = +3

Query: 639 PXPQXGPXPGXKXXGPRP-----PAGXXKXXRXXXGXSNPXPXPPXXXAXP 776
           P P  G  PG    G RP     P G  +  R   G  N    PP   A P
Sbjct: 301 PMPMQGGAPGGPPQGMRPNFYNRPMGDPQTSRPPSGNDNMGGGPPPSSATP 351



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
 Frame = +2

Query: 728 GXVXPXPXPPPXQXXPPXXPPXGGGP--XPRPXXXXRRRXPP 847
           G V P   P P Q   P  PP G  P    RP    +   PP
Sbjct: 293 GMVGPPRPPMPMQGGAPGGPPQGMRPNFYNRPMGDPQTSRPP 334


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 31.9 bits (69), Expect = 0.028
 Identities = 38/129 (29%), Positives = 41/129 (31%), Gaps = 1/129 (0%)
 Frame = +1

Query: 532 GXVXPXPPPPPXXKPXXPXXGGGGGXXXPPXGXGXAXPPKXGRXPGXXPXGPXPRRGXXX 711
           G + P PPPPP          GG     PP       PP         P  P   R    
Sbjct: 526 GPLGPPPPPPP----------GGAVLNIPPQ---FLPPPLNLLRAPFFPLNPAQLRFPAG 572

Query: 712 TXXXXXGXXTPXPPPPXXXLXPXXPPXGGGXPPPAXXXXPEAXPPXXPPXGA-GXXPXXX 888
                     P PPPP        PP G   PPP+    P A  P   P G+    P   
Sbjct: 573 FPNLPNAQPPPAPPPP--------PPMG---PPPS----PLAGGPLGGPAGSRPPLPNLL 617

Query: 889 GXXGXPPPV 915
           G  G  PPV
Sbjct: 618 GFGGAAPPV 626



 Score = 27.5 bits (58), Expect = 0.61
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +2

Query: 740 PXPXPPPXQXXPPXXPPXGGGPXPRP 817
           P P PPP     P   P  GGP   P
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGP 606



 Score = 27.1 bits (57), Expect = 0.80
 Identities = 29/106 (27%), Positives = 29/106 (27%), Gaps = 4/106 (3%)
 Frame = +1

Query: 616 PPXGXGXAXPPKXGRXPGXXPXGPXPRRGXXXTXXXXXGXXTPXP----PPPXXXLXPXX 783
           PP G G       GR     P GP P                P P      P   L P  
Sbjct: 512 PPHGAGY-----DGRDLTGGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQ 566

Query: 784 PPXGGGXPPPAXXXXPEAXPPXXPPXGAGXXPXXXGXXGXPPPVXP 921
                G P       P A PP  PP G    P   G  G P    P
Sbjct: 567 LRFPAGFPNLPNAQPPPA-PPPPPPMGPPPSPLAGGPLGGPAGSRP 611



 Score = 25.0 bits (52), Expect = 3.2
 Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
 Frame = -1

Query: 605 PPPPPXXGXXGXXXGGG--GGXGXTXPARP 522
           PPPPP  G       GG  GG   + P  P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 23.4 bits (48), Expect = 9.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 620 GGXXXPPPPPXXG 582
           GG   PPPPP  G
Sbjct: 525 GGPLGPPPPPPPG 537


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 30.3 bits (65), Expect = 0.086
 Identities = 33/121 (27%), Positives = 34/121 (28%), Gaps = 2/121 (1%)
 Frame = -1

Query: 905 GXPXXPXXXGXXPAPXGGXXGGXASGXXXXAGGGXPPPXGGXXGXSXXXGGGGXGVXXPX 726
           G P  P   G   AP GG     A G     G   P    G  G       G  G   P 
Sbjct: 389 GIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDGFDGEK--GERGQMGPK 446

Query: 725 XXXXVFXXPRRGXGPXGF--XPGXRPXLGGXAXPXPXGGXXXPPPPPXXGXXGXXXGGGG 552
               V   P    GP G     G +   G    P P G    P  P   G  G     G 
Sbjct: 447 GGQGVPGRP----GPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQPGY 502

Query: 551 G 549
           G
Sbjct: 503 G 503


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 29.1 bits (62), Expect = 0.20
 Identities = 14/41 (34%), Positives = 15/41 (36%)
 Frame = -1

Query: 869 PAPXGGXXGGXASGXXXXAGGGXPPPXGGXXGXSXXXGGGG 747
           P   GG  GG   G    +GG      GG  G      GGG
Sbjct: 650 PGSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGG 690



 Score = 25.4 bits (53), Expect = 2.5
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -1

Query: 836 ASGXXXXAGGGXPPPXGGXXGXSXXXGGGGXG 741
           + G     GGG      G  G S   GGGG G
Sbjct: 652 SGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSG 683


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.35
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -1

Query: 815 AGGGXPPPXGGXXGXSXXXGGGGXG 741
           +GGG P   GG  G     GGGG G
Sbjct: 207 SGGGAPGGGGGSSGGPGPGGGGGGG 231



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -1

Query: 920 GXTGGGXPXXPXXXGXXPAPXGGXXGG 840
           G +GGG P         P P GG  GG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGGG 231



 Score = 24.6 bits (51), Expect = 4.3
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = -1

Query: 830 GXXXXAGGGXPPPXGGXXGXSXXXGGGGXG 741
           G      GG  P  GG        GGGG G
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 24.6 bits (51), Expect = 4.3
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -2

Query: 697 AGGRGPXXFXPGXGPFWGXGPXPXXGG 617
           AGG G     PG G     GP P  GG
Sbjct: 202 AGGGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 24.6 bits (51), Expect = 4.3
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = -1

Query: 845 GGXASGXXXXAGGGXPPPXGGXXGXSXXXGGGGXG 741
           GG  SG     GGG     G   G     GGGG G
Sbjct: 203 GGGGSGGGAPGGGG-----GSSGGPGPGGGGGGGG 232



 Score = 24.2 bits (50), Expect = 5.7
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -3

Query: 870 PXPXGGXXGGXRLRXXXXGRGXGPPPXGGXXGG 772
           P   GG  GG        G   GP P GG  GG
Sbjct: 200 PGAGGGGSGGGA-PGGGGGSSGGPGPGGGGGGG 231


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 16/57 (28%), Positives = 18/57 (31%)
 Frame = -1

Query: 920 GXTGGGXPXXPXXXGXXPAPXGGXXGGXASGXXXXAGGGXPPPXGGXXGXSXXXGGG 750
           G  G G           P+   G  GG A G    + GG      G  G     GGG
Sbjct: 816 GGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGG 872



 Score = 25.4 bits (53), Expect = 2.5
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = -1

Query: 857 GGXXGGXASGXXXXAGGGXPPPXGGXXG 774
           G    G A       GGG PPP G   G
Sbjct: 749 GDARSGVAVAAALNTGGGGPPPDGSGSG 776



 Score = 25.0 bits (52), Expect = 3.2
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -1

Query: 911 GGGXPXXPXXXGXXPAPXGGXXGGXASGXXXXAGG 807
           GGG        G      GG  GG ASG     GG
Sbjct: 672 GGGAVGGGSGAGGGAGSSGGSGGGLASGSPYGGGG 706



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
 Frame = -1

Query: 920 GXTGGGXPXXPXXXGXXPAPXG-GXXGGXASGXXXXAGGG 804
           G   GG    P   G      G G  GG   G    AGGG
Sbjct: 535 GGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
 Frame = -1

Query: 845 GGXASGXXXXAGGGXPPPXGGXXGXSXX--XGGGG 747
           GG A G    AGGG     G   G +     GGGG
Sbjct: 672 GGGAVGGGSGAGGGAGSSGGSGGGLASGSPYGGGG 706


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 19/68 (27%), Positives = 20/68 (29%)
 Frame = +1

Query: 643 PPKXGRXPGXXPXGPXPRRGXXXTXXXXXGXXTPXPPPPXXXLXPXXPPXGGGXPPPAXX 822
           PP+ G  PG  P  P    G             P   PP        PP G G  PP   
Sbjct: 86  PPRPGMIPGM-PGAPPLLMGPNGPLPPPMMGMRP---PPMMVPTMGMPPMGLGMRPPVMS 141

Query: 823 XXPEAXPP 846
             P    P
Sbjct: 142 AAPPQLNP 149


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = -3

Query: 816 GRGXGPPPXGGXXGGXXXXGGGXGXG 739
           G   GP P  G  G     GG  G G
Sbjct: 84  GLSHGPSPGAGGTGSGGSGGGSGGIG 109


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -3

Query: 804 GPPPXGGXXGGXXXXGGGXGXG 739
           GP    G  GG    GGG G G
Sbjct: 539 GPVGPAGVGGGGGGGGGGGGGG 560


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 520 RGRAGXVXPXPPPPP 564
           RGRAG + P   PPP
Sbjct: 441 RGRAGPLAPYLTPPP 455


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 812 GGGXPPPXGGXXGXSXXXGGGG 747
           GGG     GG  G +   GGGG
Sbjct: 183 GGGELTTGGGTNGCTKAGGGGG 204


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,562
Number of Sequences: 2352
Number of extensions: 14403
Number of successful extensions: 93
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)