Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_N04
         (870 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015204-1|AAT94433.1|  249|Drosophila melanogaster RE66462p pro...   168   8e-42
AE014296-3582|AAN12182.1|  211|Drosophila melanogaster CG32441-P...   137   2e-32
AE014296-3581|AAN12181.1|  198|Drosophila melanogaster CG32441-P...   130   2e-30
BT024347-1|ABC86409.1|  258|Drosophila melanogaster IP09454p pro...   123   3e-28

>BT015204-1|AAT94433.1|  249|Drosophila melanogaster RE66462p
           protein.
          Length = 249

 Score =  168 bits (409), Expect = 8e-42
 Identities = 92/221 (41%), Positives = 140/221 (63%), Gaps = 6/221 (2%)
 Frame = +1

Query: 193 FTLIFVVHLTALFASTACIDYDGFLNMKLEHSLNCNDEKFCHRGSITLKSIRTGVPIIDQ 372
           F LIFV+ L +  +S   +++D ++ ++L+HSL  N E F  RG++T+ S+ +G+  ++Q
Sbjct: 29  FVLIFVLGLVS--SSWGFLEHDSWITVELQHSLAANSESFSFRGNVTIPSLNSGLANVEQ 86

Query: 373 ILFNEKHLEALKKLANEDEFYSIKTTITTGENSKGTEYLSSVKAQAFLENGLSDVINAWI 552
              +   L+ LKKLA  +EFY +K T+     +K  ++++S KA   L+  L+DV+   +
Sbjct: 87  PDLSTADLDLLKKLALGNEFYRLKATVVYSNGAKA-QFITSNKACRLLQAQLNDVLWVSL 145

Query: 553 LPNGAV--IAVNFQVANSTQPLKQATNEYKLNSKF----YLRYIEQAPVPDTASYIQKME 714
            P+G V  I V+   A +T    Q      L ++F     +R+ E APVPDTA +IQK+E
Sbjct: 146 EPSGYVTGITVSQDTAPATIECTQEDVNKLLETQFSTDVLIRHAELAPVPDTAGFIQKVE 205

Query: 715 RDREAREKGEMKDNRSFLAKYWMYIVPVAIFVMISGATNPE 837
           R+REARE+GE++DNR F AKYWMYIVPV + V ISGATN +
Sbjct: 206 REREARERGEVRDNRGFFAKYWMYIVPVVLLVFISGATNQD 246


>AE014296-3582|AAN12182.1|  211|Drosophila melanogaster CG32441-PA,
           isoform A protein.
          Length = 211

 Score =  137 bits (331), Expect = 2e-32
 Identities = 78/201 (38%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
 Frame = +1

Query: 193 FTLIFVVHLTALFASTACIDYDGFLNMKLEHSLNCNDEKFCHRGSITLKSIRTGVPIIDQ 372
           F LIFV+ L +  +S   +++D ++ ++L+HSL  N E F  RG++T+ S+ +G+  ++Q
Sbjct: 7   FVLIFVLGLVS--SSWGFLEHDSWITVELQHSLAANSESFSFRGNVTIPSLNSGLANVEQ 64

Query: 373 ILFNEKHLEALKKLANEDEFYSIKTTITTGENSKGTEYLSSVKAQAFLENGLSDVINAWI 552
              +   L+ LKKLA  +EFY +K T+     +K  ++++S KA   L+  L+DV+   +
Sbjct: 65  PDLSTADLDLLKKLALGNEFYRLKATVVYSNGAKA-QFITSNKACRLLQAQLNDVLWVSL 123

Query: 553 LPNGAV--IAVNFQVANSTQPLKQATNEYKLNSKF----YLRYIEQAPVPDTASYIQKME 714
            P+G V  I V+   A +T    Q      L ++F     +R+ E APVPDTA +IQK+E
Sbjct: 124 EPSGYVTGITVSQDTAPATIECTQEDVNKLLETQFSTDVLIRHAELAPVPDTAGFIQKVE 183

Query: 715 RDREAREKGEMKDNRSFLAKY 777
           R+REARE+GE++DNR F AKY
Sbjct: 184 REREARERGEVRDNRGFFAKY 204


>AE014296-3581|AAN12181.1|  198|Drosophila melanogaster CG32441-PB,
           isoform B protein.
          Length = 198

 Score =  130 bits (315), Expect = 2e-30
 Identities = 71/183 (38%), Positives = 114/183 (62%), Gaps = 6/183 (3%)
 Frame = +1

Query: 247 IDYDGFLNMKLEHSLNCNDEKFCHRGSITLKSIRTGVPIIDQILFNEKHLEALKKLANED 426
           +++D ++ ++L+HSL  N E F  RG++T+ S+ +G+  ++Q   +   L+ LKKLA  +
Sbjct: 10  LEHDSWITVELQHSLAANSESFSFRGNVTIPSLNSGLANVEQPDLSTADLDLLKKLALGN 69

Query: 427 EFYSIKTTITTGENSKGTEYLSSVKAQAFLENGLSDVINAWILPNGAV--IAVNFQVANS 600
           EFY +K T+     +K  ++++S KA   L+  L+DV+   + P+G V  I V+   A +
Sbjct: 70  EFYRLKATVVYSNGAKA-QFITSNKACRLLQAQLNDVLWVSLEPSGYVTGITVSQDTAPA 128

Query: 601 TQPLKQATNEYKLNSKF----YLRYIEQAPVPDTASYIQKMERDREAREKGEMKDNRSFL 768
           T    Q      L ++F     +R+ E APVPDTA +IQK+ER+REARE+GE++DNR F 
Sbjct: 129 TIECTQEDVNKLLETQFSTDVLIRHAELAPVPDTAGFIQKVEREREARERGEVRDNRGFF 188

Query: 769 AKY 777
           AKY
Sbjct: 189 AKY 191


>BT024347-1|ABC86409.1|  258|Drosophila melanogaster IP09454p
           protein.
          Length = 258

 Score =  123 bits (297), Expect = 3e-28
 Identities = 72/180 (40%), Positives = 108/180 (60%), Gaps = 6/180 (3%)
 Frame = +1

Query: 316 HRGSITLKSIRTGVPIIDQILFNEKHLEALKKLANEDEFYSIKTTITTGENSKGTEYLSS 495
           H+G+ ++  +   + I+D          + +KLA  +EFY +K T+     +K  ++++S
Sbjct: 84  HQGNFSIAGVSLTLDILDTA-------GSYEKLALGNEFYRLKATVVYSNGAKA-QFITS 135

Query: 496 VKAQAFLENGLSDVINAWILPNGAV--IAVNFQVANSTQPLKQATNEYKLNSKF----YL 657
            KA   L+  L+DV+   + P+G V  I V+   A +T    Q      L ++F     +
Sbjct: 136 NKACRLLQAQLNDVLWVSLDPSGYVTGITVSQDTAPATIECTQEDVNKLLETQFSTDVLI 195

Query: 658 RYIEQAPVPDTASYIQKMERDREAREKGEMKDNRSFLAKYWMYIVPVAIFVMISGATNPE 837
           R+ E APVPDTA +IQK+ER+REARE+GE++DNR F AKYWMYIVPV + V ISGATN +
Sbjct: 196 RHAELAPVPDTAGFIQKVEREREARERGEVRDNRGFFAKYWMYIVPVVLLVFISGATNQD 255


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,090,053
Number of Sequences: 53049
Number of extensions: 540004
Number of successful extensions: 1640
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1632
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)