Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_N04
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032637-7|CAA21610.1|  236|Caenorhabditis elegans Hypothetical ...    87   2e-17
Z82262-5|CAE17771.1|  679|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z37092-6|CAE46667.1|  334|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z37092-5|CAA85456.1|  336|Caenorhabditis elegans Hypothetical pr...    30   2.5  

>AL032637-7|CAA21610.1|  236|Caenorhabditis elegans Hypothetical
           protein Y43F8C.7 protein.
          Length = 236

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = +1

Query: 676 PVPDTASYIQKMERDREAREKGEMKDNRSFLAKYWMYIVPVAIFVMISGATNPEA 840
           P PDTA+++QKMER++ A++ G   DNRSFLAKYWMYIVPV +F +IS A NPEA
Sbjct: 175 PTPDTAAFVQKMEREKRAKQHGADADNRSFLAKYWMYIVPVVLFAVISSAVNPEA 229


>Z82262-5|CAE17771.1|  679|Caenorhabditis elegans Hypothetical
           protein C43F9.10 protein.
          Length = 679

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -3

Query: 766 RMTCYPSFLPFHVPLCHVPFFVYMTQYRELELAQYILS 653
           R+  Y   + + + L H P +VY+  Y E +LA Y+L+
Sbjct: 310 RVLVYTGDISYSLYLVHWPIYVYVKHYYENQLAAYLLA 347


>Z37092-6|CAE46667.1|  334|Caenorhabditis elegans Hypothetical
           protein F44F4.5b protein.
          Length = 334

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +1

Query: 88  FEIIYGCVFYLKIQLVIKFTNVVLIYLNXLIIMQQFTLIFVVHLTALFASTACID 252
           F + Y  +F LKI+ +   +  +L+Y + L +     +  V+  TAL  S    D
Sbjct: 40  FILTYKALFILKIRPIFHSSTKILLYTSLLFVNVHAVIFMVIQNTALIRSFTLSD 94


>Z37092-5|CAA85456.1|  336|Caenorhabditis elegans Hypothetical
           protein F44F4.5a protein.
          Length = 336

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +1

Query: 88  FEIIYGCVFYLKIQLVIKFTNVVLIYLNXLIIMQQFTLIFVVHLTALFASTACID 252
           F + Y  +F LKI+ +   +  +L+Y + L +     +  V+  TAL  S    D
Sbjct: 40  FILTYKALFILKIRPIFHSSTKILLYTSLLFVNVHAVIFMVIQNTALIRSFTLSD 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,034,975
Number of Sequences: 27780
Number of extensions: 302058
Number of successful extensions: 1001
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)