Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_N03
         (885 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063690-1|AAH63690.1|  593|Homo sapiens piggyBac transposable e...    32   3.2  
BC034479-1|AAH34479.1| 1061|Homo sapiens PGBD3 protein protein.        32   3.2  
BC028954-1|AAH28954.2|  593|Homo sapiens piggyBac transposable e...    32   3.2  
AL138760-1|CAH70290.1|  593|Homo sapiens piggyBac transposable e...    32   3.2  
AK126537-1|BAC86582.1|  467|Homo sapiens protein ( Homo sapiens ...    31   7.3  

>BC063690-1|AAH63690.1|  593|Homo sapiens piggyBac transposable
           element derived 3 protein.
          Length = 593

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 393 LWCYIESWQTSW*LHFSFDRSVFHFLAFRFRFVC 292
           L+C+    Q +W LH ++D     FL FR R VC
Sbjct: 488 LFCFELVLQNAWQLHKTYDEKPVDFLEFRRRVVC 521


>BC034479-1|AAH34479.1| 1061|Homo sapiens PGBD3 protein protein.
          Length = 1061

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 393  LWCYIESWQTSW*LHFSFDRSVFHFLAFRFRFVC 292
            L+C+    Q +W LH ++D     FL FR R VC
Sbjct: 956  LFCFELVLQNAWQLHKTYDEKPVDFLEFRRRVVC 989


>BC028954-1|AAH28954.2|  593|Homo sapiens piggyBac transposable
           element derived 3 protein.
          Length = 593

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 393 LWCYIESWQTSW*LHFSFDRSVFHFLAFRFRFVC 292
           L+C+    Q +W LH ++D     FL FR R VC
Sbjct: 488 LFCFELVLQNAWQLHKTYDEKPVDFLEFRRRVVC 521


>AL138760-1|CAH70290.1|  593|Homo sapiens piggyBac transposable
           element derived 3 protein.
          Length = 593

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 393 LWCYIESWQTSW*LHFSFDRSVFHFLAFRFRFVC 292
           L+C+    Q +W LH ++D     FL FR R VC
Sbjct: 488 LFCFELVLQNAWQLHKTYDEKPVDFLEFRRRVVC 521


>AK126537-1|BAC86582.1|  467|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44573 fis, clone UTERU3016789, moderately
           similar to SH3 domain-binding protein 3BP-2. ).
          Length = 467

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 538 QAEYGMYDSADSVKRV-LMHSVQTNTSESCTVEFVAQDSI 654
           QA+ G  DS +  ++V L +SV  NT+ESC VE  AQ  +
Sbjct: 411 QADTGGDDSDEDYEKVPLPNSVFVNTTESCEVERSAQSPV 450


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,086,308
Number of Sequences: 237096
Number of extensions: 2117944
Number of successful extensions: 3241
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3241
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)