Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_N01
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0499 + 10989645-10989929,10990303-10990395,10990952-109910...    66   3e-11
11_04_0305 - 16162063-16162096,16162282-16164365,16165283-161653...    29   6.5  

>02_02_0499 +
           10989645-10989929,10990303-10990395,10990952-10991066,
           10991187-10991297,10991701-10991783,10991872-10991929,
           10992490-10992569
          Length = 274

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 32/78 (41%), Positives = 46/78 (58%)
 Frame = +2

Query: 290 KQEKRLIVILENAQLESVKNGNSFELLNCDDHGHILRKNDRDPGSCRPDITHQSLLMLMD 469
           K+    I +LE A LE  K G + ++LN DDH + LRK +R+P   RPDI HQ+LL + D
Sbjct: 74  KRRPGAIFVLERACLEVGKVGKTMQILNSDDHANYLRKQNRNPADYRPDIIHQALLAIFD 133

Query: 470 SPFEQSWLTAGLYSYRKK 523
           SP  ++     +Y   +K
Sbjct: 134 SPLTKAGRLQAVYVRTEK 151



 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
 Frame = +3

Query: 477 LNRAGLLQ-VYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKFAIRASDGPMKLLKV 653
           L +AG LQ VY+ TEK VL EI P  R+P           QLL K +I A     KLL V
Sbjct: 136 LTKAGRLQAVYVRTEKGVLFEIKPYVRMP----------PQLLQKLSITAVGKREKLLNV 185

Query: 654 IKNPVTSHLPVGVKKITMSF 713
           IKNPVT +LPVG KKI +S+
Sbjct: 186 IKNPVTRYLPVGAKKIGLSY 205



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
 Frame = +1

Query: 649 KLLKILSRHIYQ---LESRKLLCLFSSKIVQNCRDLVPK---DEPIVMVIGAMAHGXXEV 810
           KLL ++   + +   + ++K+   +S++   N  D V K   D P+V V+GAMAHG  + 
Sbjct: 181 KLLNVIKNPVTRYLPVGAKKIGLSYSAEKSVNLFDYVAKSSDDVPLVFVVGAMAHGKIDN 240

Query: 811 XYSEXVISISNY 846
            YS+  I I NY
Sbjct: 241 EYSDDYIQICNY 252


>11_04_0305 -
           16162063-16162096,16162282-16164365,16165283-16165351,
           16168317-16169288,16169548-16169650,16170427-16170509
          Length = 1114

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 401 FLKC-DHGHHSLIAQSYFHFSRFPVVRFPG 315
           FL C DHGHHSL A++   F R  V+ F G
Sbjct: 907 FLLCHDHGHHSLTAKA---FPRLQVLFFVG 933


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,762,310
Number of Sequences: 37544
Number of extensions: 368010
Number of successful extensions: 707
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)