Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_N01
         (880 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-641|AAF45956.2|  252|Drosophila melanogaster CG3527-PA ...   132   8e-31
BT021308-1|AAX33456.1|  252|Drosophila melanogaster RE17227p pro...   126   5e-29
BT025832-1|ABF85732.1|  791|Drosophila melanogaster IP09238p pro...    29   8.5  

>AE014298-641|AAF45956.2|  252|Drosophila melanogaster CG3527-PA
           protein.
          Length = 252

 Score =  132 bits (318), Expect = 8e-31
 Identities = 61/79 (77%), Positives = 68/79 (86%)
 Frame = +3

Query: 477 LNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKFAIRASDGPMKLLKVI 656
           LNRAGLLQV++ TE NVLIEINPQTRIPRTFKRFAGLMVQLLHKF IRA+D   +L+ VI
Sbjct: 100 LNRAGLLQVFVRTEHNVLIEINPQTRIPRTFKRFAGLMVQLLHKFQIRANDSSRRLMSVI 159

Query: 657 KNPVTSHLPVGVKKITMSF 713
           KNP+T H+PVG KK  MSF
Sbjct: 160 KNPITDHVPVGCKKYAMSF 178



 Score =  114 bits (275), Expect = 1e-25
 Identities = 53/83 (63%), Positives = 61/83 (73%)
 Frame = +2

Query: 245 EFDPIPKHLVTSHIKKQEKRLIVILENAQLESVKNGNSFELLNCDDHGHILRKNDRDPGS 424
           EFD   K     H+   EKRLI++LE AQLE+VK  N+FELLNCDDH  I+RKN RDPGS
Sbjct: 23  EFDLDKKQFKVLHLNATEKRLIIVLEGAQLETVKVHNTFELLNCDDHAGIMRKNQRDPGS 82

Query: 425 CRPDITHQSLLMLMDSPFEQSWL 493
           CRPDITHQ LLML DSP  ++ L
Sbjct: 83  CRPDITHQCLLMLFDSPLNRAGL 105



 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 8/59 (13%)
 Frame = +1

Query: 694 RKLLCLFSSKIVQNCRDLVPK--------DEPIVMVIGAMAHGXXEVXYSEXVISISNY 846
           +K    FS K++ NCRDLVP         DEP+V+VIGA AHG  +  Y+E + SISNY
Sbjct: 172 KKYAMSFSGKLLPNCRDLVPHGDETSASYDEPVVIVIGAFAHGVLKTDYTEELFSISNY 230


>BT021308-1|AAX33456.1|  252|Drosophila melanogaster RE17227p
           protein.
          Length = 252

 Score =  126 bits (303), Expect = 5e-29
 Identities = 59/79 (74%), Positives = 66/79 (83%)
 Frame = +3

Query: 477 LNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKFAIRASDGPMKLLKVI 656
           LNRA LLQV++ TE NVLIEINPQTRIP TFKRFAGLMVQLLHKF IRA+D   +L+ VI
Sbjct: 100 LNRADLLQVFVRTEHNVLIEINPQTRIPWTFKRFAGLMVQLLHKFQIRANDSSRRLMSVI 159

Query: 657 KNPVTSHLPVGVKKITMSF 713
           KNP+T H+PVG KK  MSF
Sbjct: 160 KNPITDHVPVGCKKYAMSF 178



 Score =  113 bits (273), Expect = 2e-25
 Identities = 52/81 (64%), Positives = 60/81 (74%)
 Frame = +2

Query: 245 EFDPIPKHLVTSHIKKQEKRLIVILENAQLESVKNGNSFELLNCDDHGHILRKNDRDPGS 424
           EFD   K     H+   EKRLI++LE AQLE+VK  N+FELLNCDDH  I+RKN RDPGS
Sbjct: 23  EFDLDKKQFKVLHLNATEKRLIIVLEGAQLETVKVHNTFELLNCDDHAGIMRKNQRDPGS 82

Query: 425 CRPDITHQSLLMLMDSPFEQS 487
           CRPDITHQ LLML DSP  ++
Sbjct: 83  CRPDITHQCLLMLFDSPLNRA 103



 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 8/59 (13%)
 Frame = +1

Query: 694 RKLLCLFSSKIVQNCRDLVPK--------DEPIVMVIGAMAHGXXEVXYSEXVISISNY 846
           +K    FS K++ NCRDLVP         DEP+V+VIGA AHG  +  Y+E + SISNY
Sbjct: 172 KKYAMSFSGKLLPNCRDLVPHGDETSASYDEPVVIVIGAFAHGVLKTDYTEELFSISNY 230


>BT025832-1|ABF85732.1|  791|Drosophila melanogaster IP09238p
           protein.
          Length = 791

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -1

Query: 688 PTGRCDVTGFLITFKSFIGPSDALIANLCRS*TINPAKRLNVLGILVCGL 539
           P GRC         K+ +  + A IANL    + +PA  L ++GIL C L
Sbjct: 66  PFGRCPARTCTSLNKADLAVA-AKIANLSTGVSTSPASGLGIVGILPCSL 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,887,220
Number of Sequences: 53049
Number of extensions: 660604
Number of successful extensions: 1162
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)