Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_M23
         (912 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.60 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    26   1.8  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     24   5.6  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 27.5 bits (58), Expect = 0.60
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 287 HSCRHGGYYCHLRSGRGCPDCWCPPXAS 370
           + C++G  Y ++ SG GC  C C P  S
Sbjct: 921 NECKNG--YWNIVSGNGCESCNCDPIGS 946


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 135 FQPFCLLNVGVFTGPKNCDDYLHTL 61
           F P+ +L +G+  G +    +LHTL
Sbjct: 750 FWPWSVLTIGILVGMEGLSAFLHTL 774


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -2

Query: 350 SNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHH 255
           + ++S  Q+   N+   ++ +   H Q +PHH
Sbjct: 325 NKKNSQRQSAQANSGSSNNSSSHSHSQAQPHH 356


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,318
Number of Sequences: 2352
Number of extensions: 13074
Number of successful extensions: 66
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)