Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_M23
(912 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 167 1e-41
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 167 1e-41
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 167 1e-41
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 167 1e-41
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 153 2e-37
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 153 2e-37
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 50 3e-06
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 50 3e-06
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 32 0.49
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 32 0.49
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 31 0.86
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 31 0.86
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 30 2.6
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 4.6
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 4.6
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 4.6
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 29 4.6
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 29 6.1
U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 167 bits (406), Expect = 1e-41
Identities = 89/148 (60%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
Frame = +3
Query: 147 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 326
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 327 LVVAVLIAGAL-QXPANYPLYKGFIHLGAGLAVGFSXXXXXXXXXXXXXXXXRGTAQQPR 503
LVVA+++ G + A Y L KGF HL AGL G RGTAQQPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 504 LXVGMILXLIXAEVLGLYGTYRRHLPGT 587
L VGMIL LI +EVLGLYG + GT
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 167 bits (406), Expect = 1e-41
Identities = 89/148 (60%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
Frame = +3
Query: 147 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 326
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 327 LVVAVLIAGAL-QXPANYPLYKGFIHLGAGLAVGFSXXXXXXXXXXXXXXXXRGTAQQPR 503
LVVA+++ G + A Y L KGF HL AGL G RGTAQQPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 504 LXVGMILXLIXAEVLGLYGTYRRHLPGT 587
L VGMIL LI +EVLGLYG + GT
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 167 bits (406), Expect = 1e-41
Identities = 89/148 (60%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
Frame = +3
Query: 147 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 326
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 327 LVVAVLIAGAL-QXPANYPLYKGFIHLGAGLAVGFSXXXXXXXXXXXXXXXXRGTAQQPR 503
LVVA+++ G + A Y L KGF HL AGL G RGTAQQPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 504 LXVGMILXLIXAEVLGLYGTYRRHLPGT 587
L VGMIL LI +EVLGLYG + GT
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 167 bits (406), Expect = 1e-41
Identities = 89/148 (60%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
Frame = +3
Query: 147 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 326
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 327 LVVAVLIAGAL-QXPANYPLYKGFIHLGAGLAVGFSXXXXXXXXXXXXXXXXRGTAQQPR 503
LVVA+++ G + A Y L KGF HL AGL G RGTAQQPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 504 LXVGMILXLIXAEVLGLYGTYRRHLPGT 587
L VGMIL LI +EVLGLYG + GT
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 153 bits (371), Expect = 2e-37
Identities = 76/140 (54%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
Frame = +3
Query: 144 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 323
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 324 GLVVAVLIAGALQXP-ANYPLYKGFIHLGAGLAVGFSXXXXXXXXXXXXXXXXRGTAQQP 500
GLVVAV+++G ++ ANY + F GL G R +QQP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 501 RLXVGMILXLIXAEVLGLYG 560
R+ VGMIL LI AEVLGLYG
Sbjct: 140 RMFVGMILILIFAEVLGLYG 159
Score = 34.7 bits (76), Expect = 0.093
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 201 LGAAYGTAKSG-TGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGA 356
LGA Y +G G+ A+S +P + + I+ ++ A ++ +YG++VA LI GA
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVA-LILGA 168
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 153 bits (371), Expect = 2e-37
Identities = 76/140 (54%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
Frame = +3
Query: 144 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 323
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 324 GLVVAVLIAGALQXP-ANYPLYKGFIHLGAGLAVGFSXXXXXXXXXXXXXXXXRGTAQQP 500
GLVVAV+++G ++ ANY + F GL G R +QQP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 501 RLXVGMILXLIXAEVLGLYG 560
R+ VGMIL LI AEVLGLYG
Sbjct: 140 RMFVGMILILIFAEVLGLYG 159
Score = 34.7 bits (76), Expect = 0.093
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 201 LGAAYGTAKSG-TGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGA 356
LGA Y +G G+ A+S +P + + I+ ++ A ++ +YG++VA LI GA
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVA-LILGA 168
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 14/145 (9%)
Frame = +3
Query: 168 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 347
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 348 AGALQ--XPANYP------------LYKGFIHLGAGLAVGFSXXXXXXXXXXXXXXXXRG 485
G L + P L G++ G GL VG S
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 486 TAQQPRLXVGMILXLIXAEVLGLYG 560
A P L V +++ I A +GL+G
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFG 198
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 14/145 (9%)
Frame = +3
Query: 168 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 347
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 348 AGALQ--XPANYP------------LYKGFIHLGAGLAVGFSXXXXXXXXXXXXXXXXRG 485
G L + P L G++ G GL VG S
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 486 TAQQPRLXVGMILXLIXAEVLGLYG 560
A P L V +++ I A +GL+G
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFG 198
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 380 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 282
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 380 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 282
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +1
Query: 58 SECVQIVITVFGTCKYSHI*QTKWLKIIQS-------TDPSLELWGRRLLSSSAPWELPM 216
SE V ++ F TC + + T + +QS ++ W R +L +PW L M
Sbjct: 283 SEAVPLLGVFFHTCNFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLEWSPWLLRM 342
Query: 217 ELPSQE 234
++P +E
Sbjct: 343 KMPDRE 348
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 31.5 bits (68), Expect = 0.86
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 281 VDHSCRHGGYYCHLRSGRGCPDCWCP 358
V H C +GG+ + S R P C CP
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICP 1825
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 293 CRHGGYYCHLRSGRGCPDCWCPPXASQ 373
C HG Y ++ SG GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 311 YCHLRSGRGCPDCWCPPXASQ 373
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 311 YCHLRSGRGCPDCWCPPXASQ 373
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 311 YCHLRSGRGCPDCWCPPXASQ 373
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 261 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQXPANYPLY 386
RPE ++ +VMA + AIY + +++ L NY LY
Sbjct: 35 RPEYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEYNYLLY 76
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +2
Query: 314 CHLRSGR-GCPDCWCPPXASQLPP 382
C L + R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical
protein C32E8.5 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 440 SQTRESYSQTSTQVDE-PFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLR 264
S++R+ ++ T+ D+ P +K V E S+ DS + D R DDR D D R
Sbjct: 24 SRSRDRQTRRDTRRDDSPKIKREVKE--EQFSDNDSPRRRRDDRGGRRDDRRDNRRDDRR 81
Query: 263 PH 258
H
Sbjct: 82 DH 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,309,601
Number of Sequences: 27780
Number of extensions: 313336
Number of successful extensions: 793
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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